Pairwise Alignments

Query, 275 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 272 a.a., putrescine/spermidine ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  131 bits (329), Expect = 2e-35
 Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 7/259 (2%)

Query: 15  LMLFFGYLFLPLGIMAAATFNSSRFPTVTPWMGFTLGWFQALWEDQRMWAALGTSLLVGA 74
           + L  G+LFL + I++   ++ +    VT W  F+  W+ AL +D  + AA   SL V  
Sbjct: 10  IALGIGFLFLYIPIVSLIVYSFNESQLVTVWTRFSTRWYAALLQDDELIAAAWLSLRVAL 69

Query: 75  GVIALAVPLGLAAALLLDRLHSRAKTVLYALMVS-PLLTPGVIVGISTLVFWRE---WFG 130
                +V +G  A  +L R+       LY  M++ PL+ P VI GIS L+ + E   W G
Sbjct: 70  LTAFASVVIGTWAGFVLARMGRFRGFTLYTGMINAPLVIPEVIQGISLLLLFIEMAKWLG 129

Query: 131 --VSGGLFLTVVAQSSFIAAYAMLLFSARLERFDPALEEAALDLGATHGQVFRRITLPYL 188
                G+F   +       +Y  ++  +R++   P+LEEAALDLGAT  +VF  ITLP +
Sbjct: 130 WPAGRGIFTIWIGHVMLCISYVAIIVQSRVKELHPSLEEAALDLGATPLRVFFFITLPLI 189

Query: 189 MPAILSAALLAFLQSFENYNTTLFVRGL-DTTLTVYIATKVRTGLTPAVNALSLVLIALT 247
             A++S  LL+F  S ++   + F+ G   TTL + + ++VR GL P +NAL+ + IA+ 
Sbjct: 190 SQALVSGWLLSFTLSIDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATLFIAVV 249

Query: 248 VLGAVVYEILRRREARRQA 266
            +G V      +R  R++A
Sbjct: 250 TVGVVAANYFMQRAERKRA 268