Pairwise Alignments

Query, 581 a.a., Long-chain-fatty-acid--CoA ligase from Azospirillum sp. SherDot2

Subject, 566 a.a., long-chain fatty acid--CoA ligase from Herbaspirillum seropedicae SmR1

 Score =  399 bits (1024), Expect = e-115
 Identities = 233/569 (40%), Positives = 329/569 (57%), Gaps = 30/569 (5%)

Query: 13  WLASYPPTVDWGMPIPVRP-----LTELLEGAVARHGDRPCLNFLGKRTSYRELGRLVDR 67
           WLASYP     G+P  + P     L ++++ A  +H DR     +GK  SYREL  L   
Sbjct: 5   WLASYPA----GVPAEIDPGRYGSLVQMIDEAFVQHADRQAYVCMGKYLSYRELDSLSRA 60

Query: 68  AARGFQAIGVGKGTRVGLFLPNTPYYVVAFFAILKAGGTVVNFNPLYAERELVHQIGDSD 127
                Q +G+ KG RV + +PN   Y +A  AIL+AG TVVN NPLY  REL HQ+ DS 
Sbjct: 61  LGGWLQGLGLQKGARVAIMMPNVLQYPIAIAAILRAGYTVVNVNPLYTARELEHQLKDSG 120

Query: 128 IDLMVTLDLKLLYDKMARMLAETGLKRLVICRMADILPFPKNWLFPIAKKAEIAAIPRDD 187
            + +  L+       + +++A T +K +V+  M ++L   K  L  +  +     +P   
Sbjct: 121 AEAIFVLENFAC--TLQKVVAHTNIKHIVVASMGELLGALKGTLVNLVVRHVKKLVPAWS 178

Query: 188 --RHIPFARLI--ANDGRPSPVAIDAREDVAVLQYTGGTTGVPKGAMLTHANLYANTIQC 243
               I F++ +  A      PV +   +D+A LQYTGGTTGV KGA+LTH NL AN +Q 
Sbjct: 179 LPNAITFSQALSQARGKTLQPVTL-THDDIAFLQYTGGTTGVAKGAVLTHRNLVANVLQA 237

Query: 244 ATWY--AAKERKPGEGGAEDGQERMLGVLPLFHVFAMTAVMNFGLHLGAEIILLPR-FEL 300
             W   A K  KP +      Q   +  LPL+H+FA+T     G   GA  +L+P   ++
Sbjct: 238 EEWLTPALKAGKPID------QLVFVCALPLYHIFALTVCNMLGTREGALNLLIPNPRDI 291

Query: 301 EQVMRTLQKERITLFPAVPTIYTAINHHKHLKDYDLSSIRFCMSGGAPLPLEVKEAFERT 360
              ++ L K ++  FPAV T+Y A+ ++      D S  R C+ GG  +   V + +++ 
Sbjct: 292 PGFVKELAKYKVNTFPAVNTLYNALLNNADFARLDFSGYRCCVGGGMAVQKSVADKWKKL 351

Query: 361 TGCTLVEGYGLSECSPVATVNPAVLHSDKKGSIGLPLPGTIIEIVSLEEPRRVLPPGEKG 420
           TGC ++EGYGLSE SP+A+ NP  +  +  G+IGLPLP T  E   L++  + +P G+ G
Sbjct: 352 TGCPIIEGYGLSETSPIASANPCTI-DEYTGTIGLPLPST--EFAILDDDGQPVPLGQPG 408

Query: 421 EVCIRGPQVMKGYWRRPAETAQTLI-DGRLHTGDVGIMDEDGYTTIVDRIKDMILCSGFN 479
           E+ IRGPQVM GYW+RP ETA+ +  DG   TGD+G+MDE GYT IVDR KDMIL SGFN
Sbjct: 409 EIAIRGPQVMPGYWQRPDETAKVMTPDGFFKTGDIGVMDERGYTKIVDRKKDMILVSGFN 468

Query: 480 VYPRNVEEAIYLHPAVAECVVAGVPDEYRGQTVKAYVRLDDGQSLTAEALIAFLKDKLSP 539
           VYP  VE  +  HP V EC   GVPDE+ G+ VK +V   D ++L+A  L+ + K++ + 
Sbjct: 469 VYPNEVEGVVAQHPGVLECACVGVPDEHTGEAVKLFVVRKD-KTLSAAQLMDYCKEQFTG 527

Query: 540 IEMPKVVEFRQELPKTMIGKLSRKALLDE 568
            + PK +EFR ELPKT +GK+ R+ L DE
Sbjct: 528 YKKPKYIEFRDELPKTNVGKILRRELRDE 556