Pairwise Alignments

Query, 316 a.a., Tyrosine recombinase XerC from Azospirillum sp. SherDot2

Subject, 321 a.a., integrase/recombinase XerD (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (389), Expect = 3e-42
 Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 14/290 (4%)

Query: 27  SEKAVSRHTLSAYTADVGEFLRFLTEFRGGSPPSLNDLGDLKAVDFRAWMSRLAMDGLVG 86
           S + +S +TLSAY  D+ +F  FLT    G       L  L ++  R +++     G+  
Sbjct: 41  SLQGLSDNTLSAYRTDLCQFDAFLTAKGIG-------LLALDSLTLRDYLAYRFEQGMAK 93

Query: 87  ASRARKLASVRNLFRWLDRSGRLHNPAVATLATPKVKRPAPRPLTEIDADRLLEEAERDR 146
            S AR L+S+R  +R    SG L     A + +PK+ +  P  L+E   ++LL E   D 
Sbjct: 94  TSTARMLSSLRRFYRHQLVSGTLSEDPTALIESPKLPKSLPGSLSEAQVEQLLAEPSSD- 152

Query: 147 EEPWIGKRDRALFTLLYGCGLRISEALGLARKDAPLGDTL-RVTGKGRKDRMIPVLPAVT 205
            +P +  RD+A+  LLY  GLR+SE +GL   +  L   L R+ GKG K+R++P+     
Sbjct: 153 -DP-VECRDKAMLELLYATGLRVSELVGLGMSELGLRQGLVRIIGKGGKERLVPMGEVAQ 210

Query: 206 DAVRAYIESCPFTLAPDGP---LFVGTRGGRLNAGVAQHQMQKLRALMGMPDSATPHALR 262
           DA+  ++      L   G    +F   RG ++      H+++      G+    +PH LR
Sbjct: 211 DALEQFLAGPRQMLLKQGATEVVFPSNRGQQMTRQTFWHRIKLYALRAGISTELSPHTLR 270

Query: 263 HSFATHLLADGGDLRAIQDLLGHASLSTTQRYTDVENEQLMNVYRNAHPR 312
           H+FATHLL  G DLR +Q LLGH+SLSTTQ YT V   +L +++   HPR
Sbjct: 271 HAFATHLLNHGADLRVVQLLLGHSSLSTTQIYTHVARTRLADLHEKHHPR 320