Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 427 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N1B4

 Score =  174 bits (440), Expect = 4e-48
 Identities = 103/317 (32%), Positives = 166/317 (52%), Gaps = 22/317 (6%)

Query: 8   RLTGLLALGAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFG 67
           RL  ++ +  VIAV+  F  N++ L + IL     ++ +GLN+++G AG + LG+  F+ 
Sbjct: 96  RLRWIIPVMIVIAVVFPFFSNSYLLGVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYA 155

Query: 68  IGAYASGVLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSI 127
           IGAY   +     G      L   A   GL   ++  P+LRL G YLA+ TLG G I+ +
Sbjct: 156 IGAYGLALGYQYLGLGFWTVLPLAAITAGLAGCILGFPVLRLHGDYLAIVTLGFGEIIRL 215

Query: 128 VLRTESGLTGGPDGMMVEPFRIFGVEL------------------YGEKVWYW----VVG 165
           +L     LTGGP+GM       FG+E                   Y   V Y+    V+ 
Sbjct: 216 ILNNWLSLTGGPNGMAAPLPTFFGLEFGKRAKEGGVPFHEFFGIAYNPDVKYYFIYAVLF 275

Query: 166 VLLVGVVWLSLNLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSL 225
           ++++ V+++   L   P+GRA  A+   E+A   +G++    K+  F + A  A +AG  
Sbjct: 276 LVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVF 335

Query: 226 FAHYAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQQIV 285
           FA Y G + P    FF+S  ++ +VV GGM ST G V+ A VLT+ P+ L  F +Y+ ++
Sbjct: 336 FATYQGFVNPTSFTFFESALILAIVVLGGMGSTIGVVIAAFVLTVAPELLRGFAEYRVLL 395

Query: 286 LGGILMATMVFMPKGLL 302
            G +++  M++ P+GL+
Sbjct: 396 FGILMVLMMIWRPRGLI 412