Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 355 a.a., branched-chain amino acid ABC transporter permease from Azospirillum brasilense Sp245

 Score =  191 bits (484), Expect = 3e-53
 Identities = 115/306 (37%), Positives = 168/306 (54%), Gaps = 4/306 (1%)

Query: 12  LLALGAVIAVLPAFLP---NNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGI 68
           LL L      +PA +    +++   IAI      ++   LN + G AG +S+GHA F+GI
Sbjct: 32  LLLLAVAFGAVPAAIVGTGSSYLAQIAITTMIFVILSASLNHVTGTAGLLSIGHAAFYGI 91

Query: 69  GAYASGVLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIV 128
           GAYA+ +L    G P IV L A      L  FLVA P +RL   Y A+ATLGIG ++ +V
Sbjct: 92  GAYAAALLSTKLGLPFIVTLPAAGLIAALFGFLVALPTMRLVSIYFAVATLGIGEMIYVV 151

Query: 129 LRTESGLTGGPDGMM-VEPFRIFGVELYGEKVWYWVVGVLLVGVVWLSLNLIDSPMGRAL 187
           L     +T GP G+  + P  +FG +       Y  V V+ V  VW+   L  S  G AL
Sbjct: 152 LLNWVDVTRGPMGIRGIPPIELFGWQADTLLTRYLAVAVIAVACVWVLHRLTHSYYGNAL 211

Query: 188 RAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAHYAGLITPAKADFFKSIELV 247
           RA+   +  A+ +G++  R K+  FV++  FA +AG+L AH +  I P    F +SI ++
Sbjct: 212 RALREDDQCADSMGINVERLKIESFVVATFFAGIAGALLAHTSAYIAPDNFRFMESILIL 271

Query: 248 TMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQQIVLGGILMATMVFMPKGLLPTLAA 307
            MVV GG+ S  GAVVGA+ + +LP+AL    DY+ I +G  +  +++ +PKG+L    A
Sbjct: 272 AMVVVGGLGSLPGAVVGALFMIVLPEALRDIGDYRMIAVGATMFLSILLLPKGMLAEGTA 331

Query: 308 LLPARR 313
           L   RR
Sbjct: 332 LGFVRR 337