Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 598 a.a., branched-chain amino acid ABC transporter permease from Azospirillum brasilense Sp245

 Score =  201 bits (510), Expect = 5e-56
 Identities = 118/281 (41%), Positives = 166/281 (59%), Gaps = 10/281 (3%)

Query: 41  NAVVCVGLNLLIGYAGQISLGHAGFFGIGAYASGVLVGTYGWPPIVALLAGAAFVGLLAF 100
           N ++   +NLL G AGQISLGHAGF GIGAY S +L+  +G P  + LLAGAA   +  +
Sbjct: 42  NVLLAQSINLLTGVAGQISLGHAGFLGIGAYGSALLMKNFGLPLPLTLLAGAAMGAVSGW 101

Query: 101 LVAKPILRLKGHYLAMATLGIGIIVSIVLRTESGLTGGPDGMMVEP------FRIFGVEL 154
           L++    R++  YLAM TLG G+I   V+R  + +TGG  G+   P        +FG  +
Sbjct: 102 LLSFAAGRVREFYLAMMTLGFGMIFYEVVREWTSVTGGMMGLSGVPSPGLRTLTLFGWSV 161

Query: 155 YGEKVWYWVVGVLLVGVVWLSLNLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVL 214
            G   ++ ++  ++ GVVWL  N + SP GRA  A+H SEVAA  +GV  AR K   ++L
Sbjct: 162 -GPTAYFQIMLAVVAGVVWLLRNFVTSPFGRAFFAIHVSEVAAGSIGVPRARTKRNAYML 220

Query: 215 SAVFASVAGSLFAHYAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQA 274
           SA  A +AG  +AH  G + P      +S+E++ M V GG+ +  G V+GAVV T LP+ 
Sbjct: 221 SAALAGLAGGFYAHLVGYLGPETFGLHRSVEVLVMAVVGGLGTLAGPVLGAVVFTYLPEK 280

Query: 275 LTIFQDYQQIVLGGILMATMVFMPKGLLPTLAALLPARRRA 315
           L IF +YQ +V G IL+ + V +P+GL      LLP  R A
Sbjct: 281 LQIFAEYQFMVYGLILLLSFVLLPRGL---AGLLLPRPRFA 318