Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 328 a.a., high-affinity branched-chain amino acid ABC transporter (permease protein) (fragment) from Azospirillum brasilense Sp245

 Score =  198 bits (504), Expect = 1e-55
 Identities = 123/312 (39%), Positives = 179/312 (57%), Gaps = 2/312 (0%)

Query: 4   LLHGRLTGLLALGAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHA 63
           LL   L  LL    + AVL  F    FY  IA LA    ++   ++L+ G AG + LGHA
Sbjct: 1   LLIPLLLALLVFVGLPAVLAGFDRGYFY-QIANLALIFILLSASMHLVTGVAGLLHLGHA 59

Query: 64  GFFGIGAYASGVLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGI 123
            F+G+GAY + +L   +G    V L        L+AFLVA P +RL   Y A+ATL IG 
Sbjct: 60  AFYGVGAYTAALLSTKFGLGFTVTLPLSGLVAALIAFLVALPTMRLVSIYFAVATLAIGQ 119

Query: 124 IVSIVLRTESGLTGGPDGMMV-EPFRIFGVELYGEKVWYWVVGVLLVGVVWLSLNLIDSP 182
           ++ +V+      T GP+G++V +   +FG  L G    Y+ V  ++   V     L  S 
Sbjct: 120 MLYLVMLNWVEFTKGPNGIIVTKGLELFGFSLSGRLATYYTVATVVALCVLAIGRLSHSY 179

Query: 183 MGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAHYAGLITPAKADFFK 242
            G ALR++   +  A+ +GV TAR K+  F LSA FA VAGSL+AH  G I+P    F +
Sbjct: 180 YGNALRSIREDDQCADAMGVSTARLKMEAFTLSAFFAGVAGSLWAHMTGYISPGDFKFSE 239

Query: 243 SIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQQIVLGGILMATMVFMPKGLL 302
           SI ++ MVV GG+ S  GAV+GA++L LLP+ L  F D++ I++G ++  +++ +PKGLL
Sbjct: 240 SILILAMVVVGGLGSLPGAVIGALLLILLPEGLRAFGDFRNIMVGLVMFLSILLLPKGLL 299

Query: 303 PTLAALLPARRR 314
             ++AL  ARR+
Sbjct: 300 GEVSALQLARRQ 311