Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 358 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Acidovorax sp. GW101-3H11

 Score =  190 bits (482), Expect = 5e-53
 Identities = 109/298 (36%), Positives = 164/298 (55%), Gaps = 13/298 (4%)

Query: 15  LGAVIAVLPAFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGAYASG 74
           LG  +   P   P  +   +  +  ++ +V +GL LL G+ G  SLGHA F G+GAY   
Sbjct: 28  LGLTLVAAPWVAPEYWLAQLTFVLIYS-IVGLGLMLLAGFTGLFSLGHAAFLGVGAYTQA 86

Query: 75  VLVGTYGWPPIVALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVSIVLRTESG 134
           VL G  GWP  ++L   A     +  +V  P LR+KG YL MATL  G IV  V      
Sbjct: 87  VLTGM-GWPFALSLACAAGLSAAVGVVVGLPALRVKGIYLGMATLSFGFIVEEVFARWES 145

Query: 135 LTGGPDGMMVEPFRIFGVELYGEKVWYWVVGVLLVGVVWLSLNLIDSPMGRALRAVHGSE 194
           +TGG  G  + P ++FG      + +Y++  V+ V      LNL+ SP GRA  A+  SE
Sbjct: 146 VTGGNSGKHLVPPQMFGYSFESTESFYFLCLVIAVVSTLAILNLLRSPTGRAFVAIRDSE 205

Query: 195 VAAEVVGVDTARFKVLVFVLSAVFASVAGSLFAHYAGLITPAKADFFKSIELVTMVVFGG 254
           ++A+ +G+  AR+K L F LSA  A V G+L+AH    I+P + +  +SI+L+ M+V GG
Sbjct: 206 ISAQSMGIHLARYKTLSFSLSAALAGVGGALYAHKLQFISPDQFNILQSIDLLLMIVIGG 265

Query: 255 MASTFGAVVGAVVLTLLPQALTIFQDY-----------QQIVLGGILMATMVFMPKGL 301
           + S  GA +GA+ L  +PQ +++ +D+           Q +V G +L+A ++F P GL
Sbjct: 266 LGSVHGAFLGAIFLISMPQMISLSKDWLPAAIGQAPGLQAVVYGAVLIAFVLFEPMGL 323