Pairwise Alignments

Query, 315 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 429 a.a., high-affinity branched-chain amino acid ABC transporter permease LivM from Rahnella sp. WP5

 Score =  170 bits (430), Expect = 6e-47
 Identities = 109/321 (33%), Positives = 175/321 (54%), Gaps = 33/321 (10%)

Query: 12  LLALGAVIAVLP-AFLPNNFYLDIAILAGFNAVVCVGLNLLIGYAGQISLGHAGFFGIGA 70
           LLAL  +IA +   F+ +   +DIA L     ++ +GLN+++G +G + LG+ GF+ IGA
Sbjct: 91  LLALVLIIAAIAWPFIVSRGTVDIATLTLIYIMLGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 71  YASGVLVGTYG---WPPI-VALLAGAAFVGLLAFLVAKPILRLKGHYLAMATLGIGIIVS 126
           Y   +L   YG   W  + +A L  AAF  LL F    P+LRL+G YLA+ TLG G IV 
Sbjct: 151 YTYALLNHYYGIGFWEALPLAGLVSAAFGFLLGF----PVLRLRGDYLAIVTLGFGEIVR 206

Query: 127 IVLRTESGLTGGPDGMMVEPF-RIFGVELYG---EKVW--------------------YW 162
           I+L   + LTGGP+G+   P   +FG+E      +  W                    Y 
Sbjct: 207 ILLLNNTELTGGPNGISQIPKPTLFGLEFSRTPRDGGWDTFSNFFNVTYDPSDRIIFLYM 266

Query: 163 VVGVLLVGVVWLSLNLIDSPMGRALRAVHGSEVAAEVVGVDTARFKVLVFVLSAVFASVA 222
           V  +L++  +++   L+  P+GRA  A+   E+A   +G++  R K+  F +SA FA  A
Sbjct: 267 VALLLVIATLFIINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFA 326

Query: 223 GSLFAHYAGLITPAKADFFKSIELVTMVVFGGMASTFGAVVGAVVLTLLPQALTIFQDYQ 282
           G+LFA   G ++P    F +S  ++ +VV GGM S F  ++ A++L +  + +    +Y 
Sbjct: 327 GTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDLNEYS 386

Query: 283 QIVLGGILMATMVFMPKGLLP 303
            ++LG +++  M++ P+GLLP
Sbjct: 387 MLLLGALMVLMMIWRPQGLLP 407