Pairwise Alignments

Query, 861 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1548 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  293 bits (751), Expect = 4e-83
 Identities = 193/532 (36%), Positives = 282/532 (53%), Gaps = 31/532 (5%)

Query: 198  DAERRLGESEARYRLLADNATDMILEMKADGAVHYLSPSVRDILGHNPAEIVGSAPANLL 257
            + +  L ++EA YR +  +A D ++ +  +G +   +P +  +LG+   E+ G      L
Sbjct: 600  EQQAELKDTEAWYRGIVHSAPDAMVVVDGEGRIVLCNPQLERLLGYEMGELTGHLVEQFL 659

Query: 258  HPDDLESAAMAFAGLQPGSPPVTFTHRLR----HRDGHYLWVESSMRPTVGSDGG-FVVV 312
             P+++    +        SP     H        +DG  L +E S+     SD       
Sbjct: 660  -PEEVRERHVKLRNDFLASPLQVIGHEREVIGVRKDGTRLPLEISLSKLPPSDRHPMSAC 718

Query: 313  GVVRDVTERKRYEEELSAARAEAEAANRVKSEFLASMSHEIRTPLNGVIGFADLLLGTEL 372
            G +RD++ RKR E EL  A+  AE A R+KS+FLA+MSHEIRTP+N +IG A L L TEL
Sbjct: 719  GALRDISLRKRSEAELRRAKEMAEEATRLKSDFLANMSHEIRTPMNAIIGMAHLALKTEL 778

Query: 373  TAEQRQYVSLQREAGRGLLAIIGDILDYSKIEAGKLELEERAFDLHRLLRDCRDLMSNAA 432
               Q  YV   R +G+ LL I+ DILD+SKIEAGKL +E   F+L  +L    +L+S  A
Sbjct: 779  DPRQADYVRKIRASGQHLLGILNDILDFSKIEAGKLTVENTEFELETVLDTVANLVSEKA 838

Query: 433  SQKGLLLQLSLGGTVPRYVRGDEARIRQILLNLVGNAVKFTERGSVLVSAGLLSGQGGGE 492
            + KGL   L +   VP  +RGD  R+ QIL+N   NAVKFTE G +++    L     G+
Sbjct: 839  ATKGLEFVLDVAANVPPVLRGDPLRLGQILINYANNAVKFTEHGEIVIHVETLE---TGD 895

Query: 493  GEAVPAAHVRLSVSDTGPGIPATDQANLFQRFSQGDRSTTRRYGGTGLGLIISKQLSELM 552
             + +    +R +V DTG G+    +A LF  F Q D STTR+YGGTGLGL I+K+L++LM
Sbjct: 896  TDVL----LRFAVRDTGIGLTDEQKARLFVSFQQADTSTTRKYGGTGLGLAIAKKLADLM 951

Query: 553  GGHIGVQSSPGVGSTFWFELPLPVATAPGLSTVERRDAAP---TRSARILLAEDVPMNQI 609
            GG +GV S PG GSTFWF   L + +        RR   P    R  R+L+ +D P  ++
Sbjct: 952  GGGVGVDSVPGGGSTFWFTARLGLGSG-------RRALLPRIDLRGLRVLVVDDNPQARM 1004

Query: 610  VTSSILCKAGHTVEVAEDGILAVEAMRRGE-----FDLVLMDMQMPRMDGLQATAAIRQL 664
            V + +L        +A+ G  A++ +R        F +V +D QMP MDGL+    IR L
Sbjct: 1005 VLAHMLEGMTFRPVMADGGETALDLLREARDADTPFGMVFLDWQMPGMDGLETARNIRTL 1064

Query: 665  GGRRGAVPIIALTANALTDQLQLCLDVGMNDHVTKPIERETLLSAVGRWLEA 716
                  +P+  +TA+   +       VG++  + KP++   L     R L A
Sbjct: 1065 A---PDLPVAIVTAHGREEIFAASEGVGVSAVLVKPVQPSLLFDTAMRLLGA 1113



 Score =  124 bits (312), Expect = 3e-32
 Identities = 97/298 (32%), Positives = 140/298 (46%), Gaps = 42/298 (14%)

Query: 594  RSARILLAEDVPMNQIVTSSILCKAGHTVEVAEDGILAVEAMRRGEFDLVLMDMQMPRMD 653
            R +R+LL ED  +N+ V   +L +AG   + AEDG  AV  +  G++DLVLMD+QMP MD
Sbjct: 1136 RGSRVLLVEDNELNREVALGLLAEAGLVPDAAEDGAQAVRMVMEGDYDLVLMDVQMPVMD 1195

Query: 654  GLQATAAIRQLGGRRGAVPIIALTANALTDQLQLCLDVGMNDHVTKPIERETLLSAVGRW 713
            G +AT  IR+      ++PI+A+TANA+    + CL  GMNDHV KPI+ + L +A+ RW
Sbjct: 1196 GYEATRIIRR-SREADSLPIVAMTANAMRSDREACLAAGMNDHVAKPIDPDELFAALIRW 1254

Query: 714  L---------EAGTDGMLPEGDAVEEATVLAGVA--TVSDSAPVLN-------------- 748
            L         +   D   P      +A  L+G +  T   S PV                
Sbjct: 1255 LPRRGEAERQQDAADTTAPGTQPATQADTLSGASPDTSPASGPVRQHGQNGQGRQNGQND 1314

Query: 749  -RATLDT---LAETLGAD-----VLPRFIAGTLAELALRTDRISEADSSKAAAADAHAMV 799
             R  LD    L   LG       +L RF++   A+ A R     ++     A  +AH + 
Sbjct: 1315 ARHVLDPEAGLRRVLGKQATYHTLLRRFVS-QHADAATRIAGFIQSGDGAGATREAHTLK 1373

Query: 800  SLAGNVGLLELSRTARKLQ----HACEQQWPDE--PVLKADLRDAVNRASSALQAALP 851
             +AG +G   +   A  L+    HA  Q+   E   +L+  L +AV      L A  P
Sbjct: 1374 GVAGTLGARAVQSQAADLEAALRHAASQEHTTEVLALLRISLDEAVRAMHRLLDATRP 1431



 Score = 40.0 bits (92), Expect = 1e-06
 Identities = 60/249 (24%), Positives = 90/249 (36%), Gaps = 36/249 (14%)

Query: 116 LSFLTGVGFAMWSKRRGMAMGVGPLLGFGLLLTLVSTSTLLLLPTWDLALQVGQRTAPAL 175
           L F TG+G    +  R       PLL    LL ++  +TL  LP     L        AL
Sbjct: 367 LRFATGLGDVHPASLRAY-----PLLLGERLLGVLELATLGPLPPRAATLFEDMLPMAAL 421

Query: 176 LAIIPLGTLFLGGLLLREQRH----HDAERRLGESEARYRLLADNATDMILEMKADGAVH 231
              +    L    LL + +R      ++   L  SEA +R + + A   I+  +    + 
Sbjct: 422 SQEVLERNLHTRSLLDQTRRQATELEESRELLRRSEAFFRAVFETAGIGIVSERRGLGID 481

Query: 232 YLSPSVRDILGHNPAEIVGSAPANLLHPDDLESAAMAFAGLQP----------GSPP--- 278
             +P+  D +G +  E+ G    +  HPDD E+     + L P          G+P    
Sbjct: 482 RANPAFSDFIGISEPELRGRDLEDFFHPDDREALEALLSRLDPDKLEYAVPRHGNPERDG 541

Query: 279 ----------VTFTHRLRHR----DGHYLWVESSMRPTVGSDGGFVVVGVVRDVTERKRY 324
                      T T R  HR    DG   W +         D     V ++ D+TE K  
Sbjct: 542 LDAGEPDQARSTITVRAEHRYLRPDGEVRWADVRCALIGDRDITPRRVTLINDITELKEQ 601

Query: 325 EEELSAARA 333
           + EL    A
Sbjct: 602 QAELKDTEA 610