Pairwise Alignments

Query, 861 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  318 bits (816), Expect = 9e-91
 Identities = 177/406 (43%), Positives = 259/406 (63%), Gaps = 10/406 (2%)

Query: 311  VVGVVRDVTERKRYEEELSAARAEAEAANRVKSEFLASMSHEIRTPLNGVIGFADLLLGT 370
            V+ +++DVT RK++EE++ A+R EA A + +KS+F+A++SHE+RTPL+G++G AD+ L T
Sbjct: 816  VMLLLQDVTSRKQWEEQMRASRDEAAAMSELKSQFVANISHEMRTPLSGILGIADVALTT 875

Query: 371  ELT-AEQRQYVSLQREAGRGLLAIIGDILDYSKIEAGKLELEERAFDLHRLLRDCRDLMS 429
            E   A  R Y S+ +    GLL +I D+LD+S++EAG++ L++  +DLH  +RD    ++
Sbjct: 876  EGNPALLRNYFSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRDALAPLA 935

Query: 430  NAASQKGLLLQLSLGGTVPRYVRGDEARIRQILLNLVGNAVKFTERGSVLVSAGLLSGQG 489
              A +KGL L+L +   +P  +RGD  R+RQIL+NLVGNAVKFT +G+V V         
Sbjct: 936  MQAERKGLALELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVST----- 990

Query: 490  GGEGEAVPAAHVRLSVSDTGPGIPATDQANLFQRFSQGDRSTTRRYGGTGLGLIISKQLS 549
             G+G       +  ++ DTGPGIP    A++F+ F+Q D S +R++ G+GLGL IS+ L 
Sbjct: 991  -GDGVTHDRECLVFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLV 1049

Query: 550  ELMGGHIGVQSSPGVGSTFWFELPL---PVATAPGLSTVERRDAAPTRSARILLAEDVPM 606
            EL GG IGVQS+PG GS FWF LPL     A       V+     PT   RILLAED  +
Sbjct: 1050 ELQGGDIGVQSTPGEGSVFWFTLPLGDIHPARRTQRQRVDLDTRTPTTPLRILLAEDNEL 1109

Query: 607  NQIVTSSILCKAGHTVEVAEDGILAVEAMRRGEFDLVLMDMQMPRMDGLQATAAIRQLGG 666
            N+   +  L + GH+V  A DG   ++ + R   DLVLMD+QMPRM+G++AT +IR  G 
Sbjct: 1110 NREFLTIFLEEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMPRMNGMEATRSIRSSGE 1169

Query: 667  RRGAVPIIALTANALTDQLQLCLDVGMNDHVTKPIERETLLSAVGR 712
                VP+IALTA+++       +  GM+D V KP++R  L +A+ R
Sbjct: 1170 AWSTVPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAIAR 1215



 Score = 42.4 bits (98), Expect = 2e-07
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 28/207 (13%)

Query: 146 LLTLVSTSTLLLLPTW-DLALQVGQRTAPALLAIIPLGTLFLGGLLLREQRHHDAERRLG 204
           L  +V  +T   L  W + +L+ G   A    AI  LG L     L +++R    ER L 
Sbjct: 273 LRIVVGVTTDRALAEWREQSLRQGLAAAAISFAIAALGLL----ALRQKRRRLVTERALA 328

Query: 205 ESEARYRLLADNATDMILE--------MKADGA-VHYLSPSVRDILGHNPAEIVGSAPAN 255
           ESE RYR+L +N  +  +         M ADGA +  +  +    +G +P E++ +  A 
Sbjct: 329 ESERRYRVLVENFPESAVMLFSDDKRCMLADGAGLAAMGITANSAIGRSPQELLPTHAA- 387

Query: 256 LLHPDDLESAAMAFAG-LQPGSPPVTFTHRLRHRDGHYLWVESSMRPTVGSDGGFVVVGV 314
              P   E+   A AG +  GS       RL       + +  S  P +  +     + V
Sbjct: 388 ---PPLAEAIDNALAGDVWRGS--FILGERL-------IELHVSPMPPLTEEESSYCLAV 435

Query: 315 VRDVTERKRYEEELSAARAEAEAANRV 341
           +RD TE +R   EL  +      A R+
Sbjct: 436 LRDATEAERIRRELRDSAYRLNEAQRI 462