Pairwise Alignments

Query, 264 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 192 a.a., cold-shock protein from Azospirillum brasilense Sp245

 Score =  128 bits (321), Expect = 1e-34
 Identities = 87/258 (33%), Positives = 117/258 (45%), Gaps = 71/258 (27%)

Query: 6   PRSHVYRQPNVVATQVTATVKWFNPERGYGFVKVGDSGKDALLPASLVVPAGHTTLPDGA 65
           P+ + +R P +    + ATVKWFN  +G+GFV   D   DA L ++++   GH +LP+GA
Sbjct: 5   PQRNSFRAPEITQRNIRATVKWFNATKGFGFVTPEDGSPDAFLHSTVLQFCGHDSLPEGA 64

Query: 66  TVVVDLVEDRKGQQVSVLHSVDLSTAAAPARPQGRERSFGDRGDRGFGDRGGDRGGDRGG 125
           T+  DL    KG QV+ +H VD  T+ A   P                            
Sbjct: 65  TITCDLSRGPKGPQVATIHDVD--TSTASESP---------------------------- 94

Query: 126 DRGFGARRDAGGPRDRGFGDRGGDRGGFQSRNQDRGFQDRGSDRGFQDRGQDRGFQDRGG 185
                 R  A  PR   +G   G  GG             GS  G             GG
Sbjct: 95  ------RPAARAPRSDSYG---GGYGG-------------GSSYG-------------GG 119

Query: 186 PRRPQQASGPTSEMGATVKWFNGGKGYGFAQPDDGGRDVFIPARALESAGLRGLDDGQRV 245
                 A G    +  TVKWFN  KG+GF  P  GG+D+F+  RALE +GL  L DG++V
Sbjct: 120 ------AGGAEETVDGTVKWFNVSKGFGFIAPSTGGKDIFVHIRALERSGLDVLADGEQV 173

Query: 246 RMTVRQGEKGMEAVSLKI 263
           R+TVRQG KG EA  +++
Sbjct: 174 RVTVRQGVKGPEAQRVEV 191



 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 188 RPQQASGPTSEMG-----ATVKWFNGGKGYGFAQPDDGGRDVFIPARALESAGLRGLDDG 242
           RPQ+ S    E+      ATVKWFN  KG+GF  P+DG  D F+ +  L+  G   L +G
Sbjct: 4   RPQRNSFRAPEITQRNIRATVKWFNATKGFGFVTPEDGSPDAFLHSTVLQFCGHDSLPEG 63

Query: 243 QRVRMTVRQGEKGMEAVSL 261
             +   + +G KG +  ++
Sbjct: 64  ATITCDLSRGPKGPQVATI 82