Pairwise Alignments

Query, 382 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 624 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 29/314 (9%)

Query: 13  GPRNAAPRDVSATPDGDAKVAVTA---ELLSTWLGFADVQRRTLDIVQGELTRTSDHVET 69
           G  + A R  ++   GD   AV     +  S      D+Q R    + GE+ R+++ + +
Sbjct: 215 GEPDQAARLAASIAQGDLTQAVDVRPQDKTSMMAAMHDMQNRLQQTI-GEIRRSAESIAS 273

Query: 70  STLDLSERFRELARKALEQS----ERVAQIVDMAGSVDIDGERVPLDRLVVGMQDVITDM 125
           +T  ++    +L+++  +Q+    E  A + ++  +V  + +     R   G+    +++
Sbjct: 274 ATQQIAAGNGDLSQRTEQQAASLQETAASMEELTATVKQNADNA---RQASGLAHNASEI 330

Query: 126 VSNIVTLSRHAMSMVYLLDDVQKDVAELEKSIGDIDGINRQTNFLALNATIEASRAGEAG 185
            +    +    +  +  ++D  + +A++   IG I+GI  QTN LALNA +EA+RAGE G
Sbjct: 331 ATRGNDVVSRVIGTMGEINDSSRQIADI---IGVIEGIAFQTNILALNAAVEAARAGEQG 387

Query: 186 RTFAVVAQEVRHLSRSTGELADRMRGTVTAVVKGVRNGHDILRQIANTDMSPQMLAKERV 245
           R FAVVA EVR L++ +G  A  ++  ++A V+ V NG  +++Q A T M   + A +RV
Sbjct: 388 RGFAVVAGEVRSLAQRSGTAAKEIKQLISASVERVHNGSTLVQQ-AGTTMGEILQAVQRV 446

Query: 246 DKTMDSLVEQTNHFQSVLETAASVSSDMSSTIAHVITGMQFQDLTKQRIEAINDSLAIMS 305
              M  +              A+ S + S+ IA V   +   D   Q+  A+ +  A  +
Sbjct: 447 TDIMGEI--------------AAASEEQSTGIAQVGRAVTQMDEVTQQNAALVEQAAAAA 492

Query: 306 AGLGELETRIRAQV 319
           A L +   R+R  V
Sbjct: 493 ASLQDQAGRLRETV 506