Pairwise Alignments

Query, 408 a.a., Ammonia channel from Azospirillum sp. SherDot2

Subject, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  191 bits (486), Expect = 3e-53
 Identities = 138/407 (33%), Positives = 203/407 (49%), Gaps = 30/407 (7%)

Query: 9   DVLFVLMGAVMVLAMHCGFALLEVGTVRRKNQVNALVKILSDFAMSTIAYFFVGYAVAYG 68
           D  + L+   +V+ M  GFA+LE G VR KN    L K +  +A++ + Y  VGY + Y 
Sbjct: 11  DTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMYV 70

Query: 69  IDFFADAHTLVGKGSGGFAAYGYDLVK--FFFLATFAAAVPAIVSGGIAERARFWPQAGA 126
            +         G   G  AA     ++  FFF   F A   +IVSG +AER + W     
Sbjct: 71  DNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAFLVF 130

Query: 127 TLALIALFYPLLEGTVWGTRFGLQGWMAATFGQPFHDFAGSVVVHAFGGWVALGAVLNLG 186
           ++ +  + YP+     WG  F       A+ G  F DFAGS +VH  G   A+  VL LG
Sbjct: 131 SVVMTGIIYPVEGYWTWGKGF------IASLG--FVDFAGSGIVHMTGAAAAIAGVLLLG 182

Query: 187 NRRGRYRPNGSLIAIPPSNIPFLALGAWVLCVGWFGFN-----VMSAQVLDGVTGLVALN 241
            R+G+Y PNG +  IP SN+P   LG ++L +GWFGFN     ++S          V +N
Sbjct: 183 ARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVN 242

Query: 242 SLMAMVGGIVTSLVI-----SRTDPGFVHNGALAGLVAVCAGSDVMHPLGALVTGGIAGL 296
           +  A   G +++L++      + D   + NG LAGLVA+ A       L A V G +AG 
Sbjct: 243 TNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAGG 302

Query: 297 LFVWAFNKCQID-WKIDDVLGVWPLHGLCGLTGGLLAGVFGQEALGGLGGVSILSQIVGT 355
           L V  F+   +D  KIDD +G   +HG+ G  G +   +    A       +I +Q+ G 
Sbjct: 303 LVV--FSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANA-------TITAQLTGA 353

Query: 356 LGGAGFGFASGLAVYGLLRVTVGIRLDPEQEYKGADLSLHHITAYPE 402
                + F++  AV+ +L++T+GIR+  E+EY G D S   I AYPE
Sbjct: 354 AIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPE 400