Pairwise Alignments

Query, 119 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1765 a.a., sensory box histidine kinase/response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 32/112 (28%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 3    SILVVDDSRLARNMVSSVIASLRPDWTIVTAASGEEGLEIVGEAPPVAAIVDYNMPGMDG 62
            SILV DD+  AR+++ + + S+   + + T  SG+E +    +     A++D+ MP +DG
Sbjct: 1283 SILVADDNATARDIMRTTLESM--GFNVDTVRSGDEAIMRCSQQEYAVALIDWKMPNLDG 1340

Query: 63   LVLAERLKERFVGLP-IGLLTANVQDTLRRKAEALGVR-FIAKPITSDKIRD 112
            +  A+++K++    P I +++A+       + E LG+  +I+KPI++ ++ D
Sbjct: 1341 IETAKQIKQQTKNAPRILMVSAHANQDFLTQIEQLGLAGYISKPISASRLLD 1392



 Score = 31.2 bits (69), Expect = 6e-05
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 4    ILVVDDSRLARNMVSSVIASLRPDWTIVTAASGEEGLEIVGEAPPVAAIVDYNMPGMDGL 63
            IL+V+D+ +   + +  +  +    +I T  +G+  L+ + +      ++D  MP MDG 
Sbjct: 1426 ILLVEDNEMNLEVATEFLEQVGIILSIAT--NGQIALDKLAQQSFDLVLMDCQMPVMDGY 1483

Query: 64   VLAERLKER--FVGLPIGLLTANVQDTLRRKAEALGVR-FIAKPI 105
               + +++R     LP+  +TAN     +      G+   IAKPI
Sbjct: 1484 QATKAIRQRPELAQLPVIAMTANAMAGDKEMCLRAGMNDHIAKPI 1528