Pairwise Alignments

Query, 240 a.a., Inner membrane protein YohK from Azospirillum sp. SherDot2

Subject, 245 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score =  264 bits (674), Expect = 1e-75
 Identities = 129/234 (55%), Positives = 173/234 (73%)

Query: 5   LHQIWVYLSANPLAGLTLTLVAYQIGLWVFEKLGRRPVLNPVLIAVVLIAGTLSLSGIDY 64
           L  +WVYL+A+PL GLT TL AY + L V+ +LG  P+ NPVLIA+ ++   L ++   Y
Sbjct: 7   LSDVWVYLAASPLLGLTTTLAAYIVALQVYRRLGFNPLANPVLIAIAIVVSILFVTRTPY 66

Query: 65  RTYFDGAQFVHFLLGPATVALAIPLYNQFQEVRRSAVALVVALLVGSAASALSAVALVWA 124
           +TYF+GAQFVHF+LGPATVALA+PL+ Q+   RRSA+ L++ L  GS  +  SA+ + +A
Sbjct: 67  KTYFEGAQFVHFMLGPATVALALPLFRQWHNFRRSALPLMLGLAAGSVTAVASAIGIAYA 126

Query: 125 FGGSKATILSMAPKSVTSPIAMGVSEQIGGLPSLTAVFVIITGIVAASLGTWVLNLVRVK 184
            G S+  I+S+APKS T+PIAM +SE+ GGLPSLTAV VI TGI+ A L  ++LN +R+ 
Sbjct: 127 MGASRQVIVSLAPKSATTPIAMAISERFGGLPSLTAVLVICTGILGAVLVRFILNFLRID 186

Query: 185 DWRARGFGMGVAAHGIGTARALQVNEVAGAFAGLGMGLNGLATALLLPTLYHLI 238
               RGF +GVA+HGIGTARALQV+   GAFAGLGMGLNG+ TA+L+P +  L+
Sbjct: 187 SHPVRGFALGVASHGIGTARALQVSAEMGAFAGLGMGLNGVFTAVLVPVVMPLL 240