Pairwise Alignments

Query, 716 a.a., Ribonuclease R from Azospirillum sp. SherDot2

Subject, 789 a.a., exoribonuclease II protein from Sinorhizobium meliloti 1021

 Score =  629 bits (1621), Expect = 0.0
 Identities = 352/715 (49%), Positives = 464/715 (64%), Gaps = 11/715 (1%)

Query: 7   PSKDAILAFIRSSTTPVGKREIARAFKLSGSADRETLKDLLRELEADGTVERGRNKRMAP 66
           PS++ ++ FI  +     KREIA+AF L G A R  LK LLR LE DG VE+ R K +  
Sbjct: 41  PSREVLMRFIAENPQHASKREIAKAFGLKGEA-RVELKGLLRSLEEDGLVEKKR-KSLVR 98

Query: 67  PQALPAVAVLLVTGADADGELAARPLTWTGE-GNPPRIFLLPEKKSRGEEK-PLA-VGDT 123
           P  LP V VL +T  D DG+L  RP  W  + G  P + +     +R + K P+  +GD 
Sbjct: 99  PGGLPPVTVLDITIRDVDGDLIGRPAEWLDDDGVAPAVLIKQSSVARAKGKTPVGGLGDR 158

Query: 124 LLAKLARINDR---LYEARVIRRIDGEREGRILGVYRPS-ADGGRILPTDRRHKTEFLVL 179
           +LAK+    +R    Y AR+I+ +D +R+  +LGV+R +   GGR++P D+R + E L+ 
Sbjct: 159 VLAKIFPAKERGGPAYTARIIKVLD-KRKDAVLGVFRATPGGGGRLMPIDKRGE-ELLID 216

Query: 180 PPNRGDAEPGDLVFADILPAGRAGQPQARVVERLGSTDEPRAFSLIAIHAHGIPTVFPHA 239
           P   GDA+ GDLV A +   GR G P+A+V   +GS    +A S+IAIHAHGIP VFP  
Sbjct: 217 PEFIGDAKEGDLVEAHLSRIGRYGLPRAQVQNVVGSVASEKAISMIAIHAHGIPHVFPER 276

Query: 240 ALREAELAAVPAQMQREDLRDIPLVTIDGADARDFDDAVWAEADGDPENPDGWHLIVAIA 299
            L+EAE A       RED R +PL+TID ADA+D DDAV+AE D  P+NP G  + VAIA
Sbjct: 277 VLQEAEAARPATMAHREDWRTLPLITIDPADAKDHDDAVYAEPDSSPDNPGGVIVTVAIA 336

Query: 300 DVSYYVRPGSALDRTAYERGNSVYFPDRVVPMLPEALSNGLCSLRPGEDRACLAFHLWID 359
           DVS+YVR  SALD  A +RGNSVYFPDRVVPMLPE +SN LCSL+ G DR  LA  +   
Sbjct: 337 DVSWYVRARSALDLEALKRGNSVYFPDRVVPMLPERISNDLCSLKEGVDRPALAVRMRFS 396

Query: 360 RSGVLIRHRLVRGLMRSVARLIYEQVQDCHDGRPDEVTGPLADGVIAPLFGAYARLAAAR 419
           + G    H   R +MRS A+L Y+Q Q   DG PD+ TGP+ D ++ PL+ AY  L   R
Sbjct: 397 KEGRKAGHTFHRIMMRSAAKLSYQQAQTAIDGAPDDKTGPILDTILKPLWEAYRTLTRGR 456

Query: 420 AKRGTLELDLPERRVHIDERGRVAEIVRRERHDSHRLIEEFMIAANVAAAEVLERRTMPG 479
            +R  LELD+PER++ +   G V  +   ER D+H+LIEE MI ANVAAAE LE++    
Sbjct: 457 ERRQPLELDVPERKIILKPDGTVDRVFVPERLDAHKLIEEMMIQANVAAAETLEQKRQVL 516

Query: 480 LYRIHDRPSMEKMEALRGFLAGIGHPLTKSADLTPDHFTRILRKVEGTSHATLVSEVVLR 539
           +YR+HD+PS+ K E+LR FLA +   L K  ++  +HF  IL K +G  + T+V+++VLR
Sbjct: 517 IYRVHDQPSLAKQESLREFLATLDIALAKGGNMRANHFNGILAKADGKPYETIVNQMVLR 576

Query: 540 AQAQAAYSPDNIGHFGLALHRYAHFTSPIRRYADLIVHRALIRTLGLGVGGLDDETLGRL 599
           +Q+QA YSP+NIGHFGL L RYAHFTSPIRRYADLIVHRAL+  LGLG GG+  E    L
Sbjct: 577 SQSQAIYSPENIGHFGLNLLRYAHFTSPIRRYADLIVHRALVSALGLGEGGIMPEEEAAL 636

Query: 600 AEIGDHLSSTERRAATAERDAVDRYTAAFLADRIGDRFSGRISGVSRFGLFVRLDESGAD 659
            +I   +S+ ERRA  AERD +DR  A  L  R+G+ F GR+SGV++ GLFV L   GAD
Sbjct: 637 DDIAAEISTFERRAMAAERDTIDRLIAHHLNGRVGEEFDGRVSGVTKAGLFVTLPAYGAD 696

Query: 660 GLVPASSLPDDRYDHDEAAHALVGQRTGRTYRLSSPVKVVLVEADPVSGSTLFRL 714
           G +P S+L  D + +DEA  AL G+++G  YRL  PV+V LVEA P++G+  F +
Sbjct: 697 GFIPISTLGRDYFIYDEAHQALSGEKSGLGYRLGDPVQVKLVEAVPLAGALRFEM 751