Pairwise Alignments

Query, 355 a.a., Ribosomal large subunit pseudouridine synthase C from Azospirillum sp. SherDot2

Subject, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

 Score =  145 bits (366), Expect = 1e-39
 Identities = 99/305 (32%), Positives = 155/305 (50%), Gaps = 13/305 (4%)

Query: 30  VTADEADMRLDRWFKRHFPDVNHSYLQKLLRTGQVRVDGKRAETSTRLAAKQSLRIPPLA 89
           +  D A  R+D + +    ++  S + ++LR G+VRV+ KR +   +L A   +R+PP+ 
Sbjct: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPPVT 72

Query: 90  AWAAPVRGPGQGSSKPKAMSDKQIAELQALVLYRDADVIAINKPAGLAVQGGTGTSKHLD 149
                     +    P +    ++AEL+  ++Y D  ++ +NKP+G AV GG+G      
Sbjct: 73  VEVK------ENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI 126

Query: 150 AMLDALRFDGNERPKLVHRLDKDTSGVLLLARTTFAASKLTELFRGSAVRKIYWAVTVGV 209
             L ALR       +LVHR+D+DTSG+LL+A+   A   L   FR   V+K Y+A+ +G 
Sbjct: 127 EALRALRPQARFL-ELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGH 185

Query: 210 PTPYQGKIDLALAKEGGPHGERVAENKEEGKRALTVYSVQENVGKQAAFVAMWPLTGRTH 269
                  ++  L K       RV  N   GK + T + + E    +A  V   P+TGRTH
Sbjct: 186 WDAECKVVNAPLLKNEVNSIVRVNPN---GKPSETRFRILEKFA-EATLVQASPVTGRTH 241

Query: 270 QLRVHMAAVGTPILGDGKYAGQGAFLAGGAEVA-KKLHLHARRLILPHPRGGKTIDVTAP 328
           Q+RVH   +G PI  D +Y G   F A  A+   ++L LHA  +   HP   K +++ AP
Sbjct: 242 QIRVHTQYMGHPIAWDDRY-GDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAP 300

Query: 329 LPDHM 333
           L  H+
Sbjct: 301 LEAHL 305