Pairwise Alignments

Query, 355 a.a., Ribosomal large subunit pseudouridine synthase C from Azospirillum sp. SherDot2

Subject, 330 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  155 bits (393), Expect = 1e-42
 Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 9/313 (2%)

Query: 23  SKVETRIVTADEADMRLDRWFKRHFPDVNHSYLQKLLRTGQVRVDGKRAETSTRLAAKQS 82
           ++V+   +  D A  R+D +       V  S + +++R G+VRV+ KR +   +LAA   
Sbjct: 18  TQVQLISIDEDGAGQRIDNFLLAKLKGVPKSMIYRIVRKGEVRVNKKRIKPEYKLAAGDE 77

Query: 83  LRIPPLAAWAAPVRGPGQGSSKPKAMSDKQIAELQALVLYRDADVIAINKPAGLAVQGGT 142
           +R+PP+       R      + P A  ++ +A+L+  +L+ D  +I +NKPAG+AV GG+
Sbjct: 78  VRVPPVRVAEKDYR------TAPSANLNR-VAQLEDRILFEDKQIIVLNKPAGIAVHGGS 130

Query: 143 GTSKHLDAMLDALRFDGNERPKLVHRLDKDTSGVLLLARTTFAASKLTELFRGSAVRKIY 202
           G    +   L +LR    +  +LVHRLD+DTSGVLL+A+   A   L +  R   ++K+Y
Sbjct: 131 GVDYGVIESLRSLR-PTCKFLELVHRLDRDTSGVLLIAKKRMALRHLHDQLRNKQMQKVY 189

Query: 203 WAVTVGVPTPYQGKIDLALAKEGGPHGERVAENKEEGKRALTVYSVQENVGKQAAFVAMW 262
            A+  G    +   +   L K     GER+     EGK + T + V      +A+ V   
Sbjct: 190 QALVRGQWQEHDRVVKAPLLKITLKSGERIVRVNSEGKPSETRFRVLRRFD-EASLVEAS 248

Query: 263 PLTGRTHQLRVHMAAVGTPILGDGKYAGQGAFLAGGAEVAKKLHLHARRLILPHPRGGKT 322
           P+TGRTHQ+RVH    G PI  D KY+ Q    A  A+  ++L LHA +L   HP     
Sbjct: 249 PVTGRTHQIRVHCQYQGHPIACDDKYSEQKFDDAMRAKGLQRLFLHAAQLTFTHPESETQ 308

Query: 323 IDVTAPLPDHMLA 335
           + V APL   + A
Sbjct: 309 MTVQAPLDGDLTA 321