Pairwise Alignments

Query, 801 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 563 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  306 bits (783), Expect = 3e-87
 Identities = 178/366 (48%), Positives = 243/366 (66%), Gaps = 1/366 (0%)

Query: 436 AVALLLGALMAWIIDRAITHPLHAMTGAMGRLAEGDLSVDIPGGDRKDELRNMAAAMTIF 495
           A+A+    L+AW+    I+  L  +   M  LA+GDL+   P  +R DE+  MA A+ +F
Sbjct: 199 ALAVPAVGLIAWV-GTDISRVLRGLGAKMRSLADGDLNTRFPEAERGDEIGAMAKAVLVF 257

Query: 496 KDNALEMRRMEREREEMRIQIDADRRRTMNEFANGFEQAVSGVVTSLTESAGSLGRDAQE 555
           + NA + +R+E E+     +   D+RR M   A  FEQ++  VV +++++A ++   A E
Sbjct: 258 QTNARDKQRLEAEQAASAQRAGEDKRRAMLALAASFEQSIGAVVRTVSDAAATMEERAAE 317

Query: 556 MSSDAALTTAKSTAVATASQQATANVQTVAAAAEQLSASIAEISRQLNASSATASGAADK 615
           MS  AA T   +T+VA A++Q +ANVQTVAAA+E+L+ SI EISRQ+  SS  A  A   
Sbjct: 318 MSRAAAQTDELATSVAAATEQTSANVQTVAAASEELAGSIQEISRQVAESSRIAGEAVTL 377

Query: 616 AVQTNSIVEGLSMAAERIGQVVGLIGEIAEQTNLLALNATIEAARAGEAGKGFAVVATEV 675
           + + N  V GL+ A ++IG VV LI +IA QTNLLALNATIEAARAGEAGKGFAVVA+EV
Sbjct: 378 SGRANDKVGGLAEAVQKIGAVVQLINDIASQTNLLALNATIEAARAGEAGKGFAVVASEV 437

Query: 676 KNLAGQTAKATEEISAQVAEMQTATTSAVEAIRTISDAVTAISGTVTDIALEMEQQGSAT 735
           K LA QTAKATEEI+AQVA +Q+ T  AV  I+ ++  +  ++   T IA  +E+QG+AT
Sbjct: 438 KALANQTAKATEEIAAQVANIQSVTGDAVGEIQGVTQVILRVNEIATSIASAVEEQGAAT 497

Query: 736 REIAQNVQQAAEGTQQVMRNIAEVTTAATKTGGAADAVLDASRTLATQADRLRGEVQGFL 795
           REI++NVQ+AA GTQ+V  NI  VT AAT++G  A  VL+ SR L  Q D L  EV GFL
Sbjct: 498 REISRNVQEAAGGTQEVSANITGVTDAATRSGATARDVLEMSRQLGHQLDTLHREVGGFL 557

Query: 796 NKVRTA 801
            ++R A
Sbjct: 558 QQLRAA 563



 Score = 35.4 bits (80), Expect = 9e-06
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 26/234 (11%)

Query: 180 ERVLEVRRQQSDLRRNADQALADRIVAALDELVQITDTVAKDLVGTNDEESAARIAGDAR 239
           E+    +R   D RR A  ALA     ++  +V+     A  +     EE AA ++  A 
Sbjct: 270 EQAASAQRAGEDKRR-AMLALAASFEQSIGAVVRTVSDAAATM-----EERAAEMSRAAA 323

Query: 240 AYHDTVRALHGKGIAALTEVG------VAAGLDEAARGVQERAMELQKNQAMVTEALTEA 293
              +   +     +AA TE        VAA  +E A  +QE + ++ ++  +  EA+T +
Sbjct: 324 QTDELATS-----VAAATEQTSANVQTVAAASEELAGSIQEISRQVAESSRIAGEAVTLS 378

Query: 294 SKYAQSEVN---EAVMLRGLAMRLVQD--AQSAMLAQRDFLLTGSA-DAKVAAAAAVKEI 347
            + A  +V    EAV   G  ++L+ D  +Q+ +LA    +    A +A    A    E+
Sbjct: 379 GR-ANDKVGGLAEAVQKIGAVVQLINDIASQTNLLALNATIEAARAGEAGKGFAVVASEV 437

Query: 348 LAIAGQAGAVLVDREGRALIAAITEAARAFDSEFTALSSAVAKQHDASVAMAKA 401
            A+A Q        E  A +A I         E   ++  + + ++ + ++A A
Sbjct: 438 KALANQTAK--ATEEIAAQVANIQSVTGDAVGEIQGVTQVILRVNEIATSIASA 489