Pairwise Alignments

Query, 801 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 669 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  305 bits (781), Expect = 5e-87
 Identities = 207/499 (41%), Positives = 292/499 (58%), Gaps = 13/499 (2%)

Query: 313 RLVQDAQSAMLAQRDFLLTGSADAKVAAAAAVKEILAIAGQAGAVLVDREGRALIAAITE 372
           + ++  Q+A +    F+L G  D    A  +  E+     +    L   E    I  + +
Sbjct: 174 KTIRALQTARIHTTFFVLDGGLDRFGKAEESFHEVRDRLIRLRPSLGAGEEGQTIDGLLQ 233

Query: 373 AARAFDSEFTALSSAV-AKQHDASVAMAKASAAVSGQVGRLVTLQREDREAGRASA---- 427
               +      L  AV A+Q   S  M      VS   G +   +R   E  R  A    
Sbjct: 234 RIAVYGRALEHLRGAVNARQDLVSGTMDVVGPQVSALTGEMQ--KRVGEEQMRLGAVVKD 291

Query: 428 ----GMVIAIGAAV-ALLLGALMAWIIDRAITHPLHAMTGAMGRLAEGDLSVDIPGGDRK 482
               G+ +  GA V A+LLG   A +I R++  P  A+T AMGRLA+ D++VDIP  D+ 
Sbjct: 292 DIARGLAMGAGAIVLAILLGGGAAIVIGRSVAGPARALTLAMGRLADKDMAVDIPAVDQT 351

Query: 483 DELRNMAAAMTIFKDNALEMRRMEREREEMRIQIDADRRRTMNEFANGFEQAVSGVVTSL 542
           DE+  MA A+ +FK+N +    ++ +++    + D   +R M E    F++ V GV+  +
Sbjct: 352 DEIGRMAKAVLVFKENMIRADALDAKQKAEAERRDERAKRIM-EINAAFDREVGGVIGVV 410

Query: 543 TESAGSLGRDAQEMSSDAALTTAKSTAVATASQQATANVQTVAAAAEQLSASIAEISRQL 602
           + +   L   ++ MS+ A  T+A++ AV+ A++QA+ANVQTV+AAAE+LSASI EISRQ+
Sbjct: 411 STATVQLRATSESMSAIAEETSAQAAAVSAAAEQASANVQTVSAAAEELSASIEEISRQV 470

Query: 603 NASSATASGAADKAVQTNSIVEGLSMAAERIGQVVGLIGEIAEQTNLLALNATIEAARAG 662
           + S+A AS AAD A QT   V  L  +A +IG+VV +I  IA QTNLLALNATIEAARAG
Sbjct: 471 SNSTAVASEAADHAGQTREAVRNLEDSAAQIGEVVKIITNIANQTNLLALNATIEAARAG 530

Query: 663 EAGKGFAVVATEVKNLAGQTAKATEEISAQVAEMQTATTSAVEAIRTISDAVTAISGTVT 722
           EAGKGFAVVA EVK LA QTAKATEEI+ ++A++Q  T +AV AI  IS A+  +    T
Sbjct: 531 EAGKGFAVVAGEVKTLASQTAKATEEIAQRIAKVQEETEAAVTAIEAISAAIGTVREVST 590

Query: 723 DIALEMEQQGSATREIAQNVQQAAEGTQQVMRNIAEVTTAATKTGGAADAVLDASRTLAT 782
            IA  +E+Q +AT EIA+NV +AA GT++V   +  V  AAT++GGAA  V  A+R + T
Sbjct: 591 SIASAVEEQNAATGEIARNVVEAAAGTREVSSTVVGVHQAATQSGGAAVEVQQAARDVDT 650

Query: 783 QADRLRGEVQGFLNKVRTA 801
           QA  LR  +  FL +VR A
Sbjct: 651 QATLLRELITRFLAEVRAA 669



 Score = 55.8 bits (133), Expect = 7e-12
 Identities = 158/735 (21%), Positives = 264/735 (35%), Gaps = 114/735 (15%)

Query: 3   IGTRIALGFAAVLLLTVGVAFVGWNSLSTYAERVGL-------EAHTADLDTRLKSVRLE 55
           IG RI  GF+  ++L + V  +G   L    E V +        +    + T L + R +
Sbjct: 9   IGARIGYGFSVSIVLLILVGVMGGFILVRLGEVVDVFRSQTFQSSAVGQISTNLMTARFK 68

Query: 56  EARFVTERDAKAATNVPGM---LDALQAEAQQTRAALTDGEGRRLLDEVLSGIDGYRAAF 112
              F++  D   A +V  +     AL  EA        D   R LL  + SG+  Y AAF
Sbjct: 69  GKAFLSHGDPALAADVQELGRKSAALLGEANSHNLTEAD---RGLLARIESGVTAYFAAF 125

Query: 113 NNFVA---QDGEAHARTASMEMRA-RALREIAEKIGKQQSERYDLNMTSKRDADTELRHS 168
           +  +    Q  EA+A   S+     RA+  + + +       Y +      +A  E+  +
Sbjct: 126 SKIIGLQRQREEAYATLVSLGPDLDRAMAGLLDGV-------YGVGSI---EATMEVAKT 175

Query: 169 MDTAERANRVIERVLEVRRQQSDLRRNADQALADRIVAALDELVQITDTVAKDLVGTNDE 228
           +   + A   I     V     D    A+++  +      D L+++  ++     G   +
Sbjct: 176 IRALQTAR--IHTTFFVLDGGLDRFGKAEESFHE----VRDRLIRLRPSLGAGEEGQTID 229

Query: 229 ESAARIAGDARAYHDTVRALHGKGIAALTEVGVAAGLDEAARGVQERAMELQKNQAMVTE 288
               RIA   RA        H +G     +  V+  +D     V     E+QK    V E
Sbjct: 230 GLLQRIAVYGRALE------HLRGAVNARQDLVSGTMDVVGPQVSALTGEMQKR---VGE 280

Query: 289 ALTEASKYAQSEVNEAVMLRGLAMRLVQDAQSAMLAQRDFLLTGSADAKVAAAAAVKEIL 348
                    + ++      RGLAM                           A A V  IL
Sbjct: 281 EQMRLGAVVKDDI-----ARGLAM--------------------------GAGAIVLAIL 309

Query: 349 AIAGQAGAVLVDREGRALIAAITEAARAFDSEFTALSSAVAKQHDASVAMAKASAAVSGQ 408
              G   A+++ R       A+T A      +  A+      Q D    MAKA       
Sbjct: 310 --LGGGAAIVIGRSVAGPARALTLAMGRLADKDMAVDIPAVDQTDEIGRMAKAVLVFKEN 367

Query: 409 VGRLVTL---QREDREAGRASAGMVIAIGAAVALLLGALMAWIIDRAITHPLHAMTGAMG 465
           + R   L   Q+ + E     A  ++ I AA    +G ++   +    T  L A + +M 
Sbjct: 368 MIRADALDAKQKAEAERRDERAKRIMEINAAFDREVGGVIG--VVSTATVQLRATSESMS 425

Query: 466 RLAEGDLSVDIPGGDRKDELRNMAAAMTIFKDNA-LEMRRMEREREEMRIQIDADRRRTM 524
            +AE              E    AAA++   + A   ++ +    EE+   I+   R+  
Sbjct: 426 AIAE--------------ETSAQAAAVSAAAEQASANVQTVSAAAEELSASIEEISRQVS 471

Query: 525 NEFANGFEQA-----VSGVVTSLTESAGSLGRDAQ---EMSSDAALTTAKSTAVATASQQ 576
           N  A   E A         V +L +SA  +G   +    +++   L    +T  A  + +
Sbjct: 472 NSTAVASEAADHAGQTREAVRNLEDSAAQIGEVVKIITNIANQTNLLALNATIEAARAGE 531

Query: 577 ATANVQTVAAAAEQLSASIAEISRQLNASSATASGAADKAVQTNSIVEGLSMAAERIGQV 636
           A      VA   + L++  A+ + ++    A      + AV   + +E +S A   + +V
Sbjct: 532 AGKGFAVVAGEVKTLASQTAKATEEIAQRIAKVQEETEAAV---TAIEAISAAIGTVREV 588

Query: 637 VGLIGEIAEQTNLLALNATIEAAR-AGEAGKGFAVVATEVKNL---AGQTAKATEEISAQ 692
              I    E+ N     AT E AR   EA  G   V++ V  +   A Q+  A  E+   
Sbjct: 589 STSIASAVEEQNA----ATGEIARNVVEAAAGTREVSSTVVGVHQAATQSGGAAVEVQQA 644

Query: 693 VAEMQTATTSAVEAI 707
             ++ T  T   E I
Sbjct: 645 ARDVDTQATLLRELI 659