Pairwise Alignments

Query, 801 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 716 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  268 bits (684), Expect = 1e-75
 Identities = 207/562 (36%), Positives = 302/562 (53%), Gaps = 51/562 (9%)

Query: 262 AAGLDEAARGVQERAMELQKNQAMVTEALTEASKYAQSEVNEAVMLRGLAMRL-----VQ 316
           AAG+  A   + +R   + +++A+    LT  ++     +++A+ LRG  +R      ++
Sbjct: 184 AAGIF-AVHNMDQRLQSVYEDRAVPLGQLTAINERL---LDDAMALRGAVVRAKVGKQIR 239

Query: 317 DAQSAMLAQRD----FLLTGSADAKVAAAAAVKEILAIAGQAGAVLVDREGRALIAAITE 372
           D    + A R+         +A    A   AV +  + A QA    V   G  ++AA   
Sbjct: 240 DVAGRIAANRERSDQLFADYTATRLTAGEKAVADAFSAARQAYFDEVVGPGVGMVAA--- 296

Query: 373 AARAFDSEFTALSSAVAKQHDASVAMAKASAAVSGQVGRLVTLQ----REDREAGRASAG 428
                  EF  L   +  + +     AK       ++ +LV LQ    R++  +G+    
Sbjct: 297 ------REFDRLGELMTGRAEDLFRAAKT------ELDKLVALQVQGARDEYSSGQREYV 344

Query: 429 MVIAIGAA---VALLLGALMAWIIDRAITHPLHAMTGAMGRLAEG--DLSVDIPGGDRKD 483
            ++AI      + L LG L      RAIT PL  +   M  +A+G  D  V I   +R D
Sbjct: 345 TMLAISITLLLIGLFLGVLNGVFTTRAITVPLRRLNTVMSNIAQGKFDSRVVI---ERDD 401

Query: 484 E----LRNMAAAMTIFKDNALEMRRMEREREEMRIQIDADRRRTMNEFANGFEQAVSGVV 539
           E    LRN+ A       N L   R E +    R  +   R+  M + AN FE AV  ++
Sbjct: 402 EAGVALRNIQAMQ-----NQLFFSREEEKDAAQRTALQ--RKLDMLQLANEFEAAVGEII 454

Query: 540 TSLTESAGSLGRDAQEMSSDAALTTAKSTAVATASQQATANVQTVAAAAEQLSASIAEIS 599
            +++ ++  L   A  ++S A  +   +  VA AS+QA +NVQ+VA+A EQ+S+S++EIS
Sbjct: 455 ETVSSASTELEASASSLTSTAERSRELTVTVAAASEQAASNVQSVASATEQMSSSVSEIS 514

Query: 600 RQLNASSATASGAADKAVQTNSIVEGLSMAAERIGQVVGLIGEIAEQTNLLALNATIEAA 659
           RQ+  S+  A  + ++A  TN  V  LS AA RIG VV LI  IA QTNLLALNATIEAA
Sbjct: 515 RQVQESARIAVESVNQARHTNDRVSELSQAAGRIGAVVELINNIAGQTNLLALNATIEAA 574

Query: 660 RAGEAGKGFAVVATEVKNLAGQTAKATEEISAQVAEMQTATTSAVEAIRTISDAVTAISG 719
           RAGEAG+GFAVVA EVK LA QTAKAT +IS Q++ +Q  T  +V AIR I   +  ++ 
Sbjct: 575 RAGEAGRGFAVVAQEVKILAEQTAKATGDISQQISGIQAGTEESVAAIRQIGITIDRMAE 634

Query: 720 TVTDIALEMEQQGSATREIAQNVQQAAEGTQQVMRNIAEVTTAATKTGGAADAVLDASRT 779
             + +A  +E+QG+AT+EIA+NVQQAA GT QV  NIA V   A +TG A+  VL A++ 
Sbjct: 635 IASTVASAVEEQGAATQEIARNVQQAAHGTIQVSSNIASVRQGAAETGSASSQVLAAAQA 694

Query: 780 LATQADRLRGEVQGFLNKVRTA 801
           L+  ++RL+ EV  FL+ VR A
Sbjct: 695 LSHDSNRLKTEVSRFLSTVRAA 716



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 8/146 (5%)

Query: 38  LEAHTADLDTRLKSVRLEEARFVTERDAKAATNVPGMLDALQAEAQQTRAA-----LTDG 92
           +EA  A    R  +V  +E + + E+ AKA  ++   +  +QA  +++ AA     +T  
Sbjct: 571 IEAARAGEAGRGFAVVAQEVKILAEQTAKATGDISQQISGIQAGTEESVAAIRQIGITID 630

Query: 93  EGRRLLDEVLSGIDGYRAAFNNFVAQDGEAHARTASMEMRARALREIAEKIGKQQSERYD 152
               +   V S ++   AA         +A   T  +     ++R+ A + G   S+   
Sbjct: 631 RMAEIASTVASAVEEQGAATQEIARNVQQAAHGTIQVSSNIASVRQGAAETGSASSQVLA 690

Query: 153 LNMTSKRDAD---TELRHSMDTAERA 175
                  D++   TE+   + T   A
Sbjct: 691 AAQALSHDSNRLKTEVSRFLSTVRAA 716