Pairwise Alignments

Query, 472 a.a., UDP-N-acetylmuramate--L-alanine ligase from Azospirillum sp. SherDot2

Subject, 484 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Shewanella loihica PV-4

 Score =  379 bits (974), Expect = e-110
 Identities = 193/449 (42%), Positives = 285/449 (63%), Gaps = 13/449 (2%)

Query: 11  IHFVGIGGIGMSGIAEVLRNLGYTVQGSDLAENANVKRLRELGIKVFVGHRGENIAGAAV 70
           IHFVGIGG GM GIAEVL N GY + GSD+AENA   RL+ LG  +F+GH  + + GA V
Sbjct: 24  IHFVGIGGAGMGGIAEVLVNEGYRLSGSDIAENAVTARLKRLGAAIFIGHSADQVEGADV 83

Query: 71  VVVSSAVKRDNPEVVAARAALVPVVRRAEMLGELMRLKWAIAIGGTHGKTTTTSMVGHML 130
           VVVS+A+   NPE++AA+   +P+VRRAEML ELMR +  +A+ GTHGKTTTTS++  + 
Sbjct: 84  VVVSTAIDASNPEILAAQERRIPIVRRAEMLAELMRYRHGVAVAGTHGKTTTTSLIASVY 143

Query: 131 EHANLDPTVINGGIINAYGSNTRLGTGDWMVVEADESDGTFVKLPACIAVVTNMDPEHLD 190
             A  DPT + GG++N+ G+N RLG   +++ EADESD +F+ L   ++VVTN++ +H+D
Sbjct: 144 GQAERDPTFVIGGLLNSAGTNARLGKSRYLIAEADESDASFLHLQPMVSVVTNIEADHMD 203

Query: 191 FY-GTFDNARAAFDSFVQNIPFYGFAALCIDHPEVQAMIPRVSDRRIVTYGFSPQADIRA 249
            Y G F+  ++ F  F+ N+PFYG A  CID P V+ ++PR+  R++VTYGFS  AD++A
Sbjct: 204 TYEGDFEKLKSTFVDFLHNLPFYGVAVACIDDPVVREILPRIG-RKVVTYGFSEDADVQA 262

Query: 250 VNVELGPDGAKYDVLIYDRHTGESRAIAGVRLPMYGPHNVQNSLACFAVGNEMGLPDVVM 309
           +N E     +++ V        E  A   +R+ + G HNV N+LA  AV  E  + D  +
Sbjct: 263 LNFEQQGYSSRFTV------RREGMADLDLRVNLPGRHNVLNALAAIAVATEDEIEDEAI 316

Query: 310 RDSMAKFQGVKRRFTKTGE----TNGITVIDDYGHHPVEIAAVLKAARTAGTG-RTIAVV 364
             ++ +FQG+ RRF + GE       + ++DDYGHHP E+AA +KAAR+     R + + 
Sbjct: 317 IRALDEFQGIGRRFQQLGEFTTTAGEVMLVDDYGHHPSEVAATIKAARSGWPDKRLVMIY 376

Query: 365 QPHRYSRLAALFEEFCTCFNDADAVIVADVYAAGEAPIEGVSRDSLVEGLRMHGHRHVVA 424
           QPHRYSR   L+++F       D +++ DVY+AGEAP+ G    +L   +R  G    + 
Sbjct: 377 QPHRYSRTRDLYDDFVEVLAQVDCLLLLDVYSAGEAPVPGADSRALCRSIRQRGQLDPIF 436

Query: 425 LHGQQELAQVVREMAKPGDFVVCLGAGNI 453
           +   ++L  ++  + + GD ++  GAGNI
Sbjct: 437 VAEPEQLQTILPGVLQGGDLLLTQGAGNI 465