Pairwise Alignments

Query, 610 a.a., ABC transporter ATP-binding protein uup from Azospirillum sp. SherDot2

Subject, 639 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  486 bits (1251), Expect = e-141
 Identities = 291/645 (45%), Positives = 383/645 (59%), Gaps = 50/645 (7%)

Query: 5   APITALQGVSVTFGGRPLFDGIDLSIGRGDRACLVGRNGSGKSTLMKVLAGMIQPDGGTV 64
           A IT   G+ + FG  PL D  D ++   +R CLVGRNG+GKSTLMKVLAG I  D G +
Sbjct: 2   ALITIHNGL-LAFGDHPLLDHADFALQENERVCLVGRNGAGKSTLMKVLAGEILLDDGKM 60

Query: 65  FVQPGARLAYLPQEPDFTGCATVQDYVVQGLP----------------ADEQDEAH---- 104
            V     ++ L Q+P      TV DYV  GL                 A +  E++    
Sbjct: 61  QVMQDVVVSRLEQDPPRNQAGTVFDYVSGGLQGIGEQLKIYQDQLDLVATDPSESNINKL 120

Query: 105 -----------------RVDAVLDRLQVDGNLDPRTLSGGESRRTALARTLVGNPDVMLL 147
                            R+  VL  L++DG+     LSGG  R+ ALAR L  +PDV+LL
Sbjct: 121 AHIQEQLEVSGAWRFEDRIKNVLGSLKLDGHTKLTDLSGGWQRKAALARALACDPDVLLL 180

Query: 148 DEPTNHLDLPTIEWLEEELLSFRGGLLLISHDRAFLNRLAKRTLWLDRGTVRATDRGFAE 207
           DEPTNHLD+ TIEWLE  L  FRG ++ ISHDRAF+  +A R + LDRG + +    +  
Sbjct: 181 DEPTNHLDVTTIEWLEGFLKDFRGSIIFISHDRAFIKSMATRIVDLDRGQLSSFPGDYEN 240

Query: 208 FETWQAEVFESEEAAAHKLDRKIESEMKWLREGISARRTRNMGRVRNLLDLRAGRAEQIK 267
           + T + E+   EE    + D+K+  E  W+R+GI ARRTRN GRVR L  LR  R+E+ +
Sbjct: 241 YLTEKEEMLRVEELQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKRLRQERSERRE 300

Query: 268 GGQQAKLAIAEAERGGRLVIEATGISKGFDTPDGHKTIVKDFSTRILRGDRVGLIGPNGA 327
              +  L I ++ R G++V EA  +        G KTIV  FS  I+RGDR+ LIGPNG 
Sbjct: 301 VQGKVNLQIDDSNRSGKIVFEAENLHYSI----GGKTIVDGFSFNIMRGDRIALIGPNGC 356

Query: 328 GKSTLLKMLTGQLDPDEGTVKLGTNLDTAYFDQRREGLNPEDTIRKVLCPFGGDAVVVNG 387
           GKSTLLK+L G L PD G V  GT L+ AYFDQ RE L+PE T+   L   G   V+V G
Sbjct: 357 GKSTLLKILLGDLQPDSGKVHCGTKLEVAYFDQYRELLDPEKTVIDNLAD-GKQEVMVGG 415

Query: 388 VSRHVAGYMKDFLFDTRQLDSPVKALSGGERNRLLLARLFAKPSNMMILDEPTNDLDMDT 447
             RH   Y++DFLF  ++  +PVKALSGGE+NRLLLAR+  K +N+++LDEPTNDLD++T
Sbjct: 416 RLRHALSYLQDFLFSPKRARTPVKALSGGEKNRLLLARILLKANNLLVLDEPTNDLDIET 475

Query: 448 LDLLEDVLGDYQGTLLLVSHDRDFLDRLVTATIALEGDGTATEYAGGYSDYLVQRPAKAA 507
           L+LLE++L +YQGTLLLVSHDR+F+D  VT++   EGDG   E+ GGY D   QR     
Sbjct: 476 LELLEELLANYQGTLLLVSHDREFVDNTVTSSWIFEGDGKIEEFVGGYHDAQQQRAQVLQ 535

Query: 508 PAAAS---AKPKPAAQAPAAA---TKPRGKLTYKDQRELDELPTRMDSLGGEIARLEKAL 561
             AA     K K   ++P +A   TK + KL+YK QREL+ LP R++ L  EIA L+  +
Sbjct: 536 SRAAENIVKKEKVVEESPKSAPSKTKQK-KLSYKLQRELEALPQRLEELEVEIAALQDIV 594

Query: 562 ADPDLFTRDPAKFQKTSEQLHAKQAALAAAEERWLELEAMREELE 606
             PD F++   K Q   ++L A +  L  A ERW ELEAM++E E
Sbjct: 595 NSPDFFSQPVDKTQPILDKLTATEQELEIAFERWEELEAMQQESE 639