Pairwise Alignments

Query, 501 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 563 a.a., methyl-accepting chemotaxis protein from Azospirillum brasilense Sp245

 Score =  171 bits (433), Expect = 6e-47
 Identities = 99/217 (45%), Positives = 142/217 (65%), Gaps = 5/217 (2%)

Query: 281 ELRQAELDGERRSSIANLAESLDREVGTAADRATANAQTVAAATEELSASISDISNRANE 340
           E R AE+     S  A   + L   V  A ++ +AN QTVAAA+EEL+ SI +IS +  E
Sbjct: 312 EERAAEM-----SRAAAQTDELATSVAAATEQTSANVQTVAAASEELAGSIQEISRQVAE 366

Query: 341 ASGASLKASEEATRTNAAVEALVTSAERIGAITKLINSIASQTNLLALNATIEAARAGEA 400
           +S  + +A   + R N  V  L  + ++IGA+ +LIN IASQTNLLALNATIEAARAGEA
Sbjct: 367 SSRIAGEAVTLSGRANDKVGGLAEAVQKIGAVVQLINDIASQTNLLALNATIEAARAGEA 426

Query: 401 GRGFAVVANEVKSLAQQSGSAADDIAAQIASVQQEALHAVDAIRRIGSIVTDVQQISTTI 460
           G+GFAVVA+EVK+LA Q+  A ++IAAQ+A++Q     AV  I+ +  ++  V +I+T+I
Sbjct: 427 GKGFAVVASEVKALANQTAKATEEIAAQVANIQSVTGDAVGEIQGVTQVILRVNEIATSI 486

Query: 461 AAAVSQQESATKEIAHSVTRVVRDIEVVSQNIASTSE 497
           A+AV +Q +AT+EI+ +V       + VS NI   ++
Sbjct: 487 ASAVEEQGAATREISRNVQEAAGGTQEVSANITGVTD 523



 Score = 32.0 bits (71), Expect = 6e-05
 Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 372 ITKLINSIASQTNLLA---LNATI-EAARAGEAGR-GFAVVANEVKSLAQQSGSAADDIA 426
           I++++  + ++   LA   LN    EA R  E G    AV+  +  +  +Q   A    +
Sbjct: 215 ISRVLRGLGAKMRSLADGDLNTRFPEAERGDEIGAMAKAVLVFQTNARDKQRLEAEQAAS 274

Query: 427 AQIASV-QQEALHAVDAI--RRIGSIVTDVQQISTTI---AAAVSQQESATKEIAHSVTR 480
           AQ A   ++ A+ A+ A   + IG++V  V   + T+   AA +S+  + T E+A SV  
Sbjct: 275 AQRAGEDKRRAMLALAASFEQSIGAVVRTVSDAAATMEERAAEMSRAAAQTDELATSVAA 334

Query: 481 VVRDIEVVSQNIASTSERL 499
                    Q +A+ SE L
Sbjct: 335 ATEQTSANVQTVAAASEEL 353



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 313 ATANAQTV---AAATEELSASISDISNRANEASGASLKASEEATRTNAAVEALVTSAERI 369
           AT+ A  V    AAT E+S ++ + +    E S      ++ ATR+ A    ++  + ++
Sbjct: 483 ATSIASAVEEQGAATREISRNVQEAAGGTQEVSANITGVTDAATRSGATARDVLEMSRQL 542

Query: 370 G 370
           G
Sbjct: 543 G 543