Pairwise Alignments

Query, 501 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 688 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  185 bits (470), Expect = 4e-51
 Identities = 105/227 (46%), Positives = 152/227 (66%), Gaps = 3/227 (1%)

Query: 267 ACGSLIDIHGQKMAELRQAELDGERRSSIANLAESLDREVGTAADRATANAQTVAAATEE 326
           A G +ID       EL   E      ++ A  ++ L   V  A+++A+AN Q+VA+ATEE
Sbjct: 421 AVGEIIDTVTSASTEL---EASAGTLTTTAEHSQMLAGSVAAASEQASANVQSVASATEE 477

Query: 327 LSASISDISNRANEASGASLKASEEATRTNAAVEALVTSAERIGAITKLINSIASQTNLL 386
           +++SI++IS +  EA+  + +A E+A +TN  +  L  +A RIG +  LIN+IA QTNLL
Sbjct: 478 MASSITEISRQVQEAARIANEAVEQARKTNDRIGTLAQAANRIGDVVDLINTIAGQTNLL 537

Query: 387 ALNATIEAARAGEAGRGFAVVANEVKSLAQQSGSAADDIAAQIASVQQEALHAVDAIRRI 446
           ALNATIEAARAG+AGRGFAVVA EVK+LA+Q+G A  +I++QI S+Q     +V AIR I
Sbjct: 538 ALNATIEAARAGDAGRGFAVVAQEVKALAEQTGKATGEISSQIGSMQSATQESVGAIREI 597

Query: 447 GSIVTDVQQISTTIAAAVSQQESATKEIAHSVTRVVRDIEVVSQNIA 493
           G  +  + +I++TIA+AV +Q +AT+EI+ +V +  R    VS NIA
Sbjct: 598 GGTIERMSEIASTIASAVEEQGAATQEISRNVQQAARGTHEVSSNIA 644



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 420 SAADDIAAQIASVQQEALHAVDAIRRIGSIVTDVQQISTTIAAAVSQQESATKEIAHSVT 479
           SA+ ++ A   ++   A H+       GS+    +Q S  + +  S    AT+E+A S+T
Sbjct: 431 SASTELEASAGTLTTTAEHSQ---MLAGSVAAASEQASANVQSVAS----ATEEMASSIT 483

Query: 480 RVVRDIEVVSQNIASTSERLR 500
            + R ++  ++      E+ R
Sbjct: 484 EISRQVQEAARIANEAVEQAR 504