Pairwise Alignments

Query, 443 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 647 a.a., 23S rRNA pseudouridine2605 synthase from Paraburkholderia graminis OAS925

 Score =  174 bits (441), Expect = 7e-48
 Identities = 146/451 (32%), Positives = 202/451 (44%), Gaps = 43/451 (9%)

Query: 8   KKSDSANNGGERIAKRLARAGLCSRRDAERWIAEGRVAVNSRVLDSPACV---VRPGDIV 64
           K+  SA++   ++ K LA AG+ SRRD E  I  GRV+VN      PA +   + P D V
Sbjct: 221 KRVLSADDDAPKLHKVLAEAGMGSRRDMEELIVAGRVSVNGE----PAHIGQRIMPTDQV 276

Query: 65  QVDGKVIPEP---EPARLWRYHKPSGLVTTARDEKGRETVFDRLPP-DLPRVVSIGRLDL 120
           +++GK +      +P R+  YHKP+G + +  D +GR +VFD+LPP    + +++GRLD 
Sbjct: 277 RINGKPVKRKLANKPPRVLLYHKPTGEIVSHADPEGRPSVFDKLPPMKTAKWLAVGRLDF 336

Query: 121 TTEGLLLLTNDGELARFLELPATGWTRRYRVRVFGEVDERQLAALEKGPTIEGVKYGPIE 180
            TEGLL+LT  G+LA     P     R Y VRV GE+ E     L  G  ++      + 
Sbjct: 337 NTEGLLMLTTSGDLANRFMHPRYSVEREYAVRVVGELAEGMRQKLLNGVELDDGPANFLR 396

Query: 181 AALDRIQGRNAWLTVSLKEGKNREIRKVMESLGLQVNRLIRVAYGPFQLGK-LEEGAVEE 239
                 +G N W  V+L EG+NRE+R++ E+ GL V+RLIR  +GP  L K L+ G  EE
Sbjct: 397 IRDGGGEGTNHWYHVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPISLPKGLKRGRWEE 456

Query: 240 VPKRVVREQIASFFGTPEGAESTESGTKQRAKARAEAAGKSGPKAAAPSKGGAANADATK 299
           +    VR  +AS             G K  ++ R       G + AAP +        + 
Sbjct: 457 LEDNQVRALMASV------------GLKAPSEER-------GGRNAAPERKQPDPMQTSM 497

Query: 300 AAPKRAPRSATKRHEAEAARTEETKPARRGGATRGTLSLGGGSAKPGRSGKPEGARSDAP 359
               R P   +     +  R +  + A  GG   G  +  G     G  G   GA     
Sbjct: 498 GFINREPVLMSHSRFEQQPRGQGRRGAAGGGFGGGAGAGTGFGGGYGNRGTGRGAGGAGG 557

Query: 360 RSEGARSRDDRARDDRAREDRPRDGKAPGFKPGGSKPTGPKGAGPKGAGPAPRGG----P 415
            S GA      A   R   D   DG      P GS    P G G +  G  P  G     
Sbjct: 558 FSGGAGGAGGGAGGPRGGRD--VDGNR---APSGSGNRAPSGGGKRAGGNGPNAGGGNRA 612

Query: 416 KAGGERSGDRPGGG---AGGRTERPRADRRR 443
            AG   + +R GGG   AGG      A R R
Sbjct: 613 PAGNRGNANRSGGGNPNAGGANRSGGAPRGR 643



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 45/168 (26%), Positives = 66/168 (39%), Gaps = 35/168 (20%)

Query: 259 AESTESGTKQRAKARAEAAGKSGPKAAAPSKGGAANADATKAAP-KRAPRSATKRHEAEA 317
           A++TE+  + R +       + GP++    +   A   A + AP + AP +     E EA
Sbjct: 38  AQTTEADGEDRPRRGL----RRGPRSLIARRRAGAKTKAVEGAPGQAAPAAGEAAPEGEA 93

Query: 318 ARTEETKPARR--GGATRGTLSLGGGSAKPG---------RSGKPEGA-RSDAPRSEGAR 365
               + +P R+  G   +G     GG+ + G         R G+ +GA R  APR EGA 
Sbjct: 94  VA--QARPPRKDAGAKGQGPRRNAGGAKREGQRDGQRDGQRDGQRDGAPREGAPR-EGAP 150

Query: 366 SRDDRARDDRAREDRPRDGKAPGFKPGGSKPTGPKGAGPKGAGPAPRG 413
               R R  RA               GG +     G  P  AG A  G
Sbjct: 151 REGQRERQPRA---------------GGQRQNRRGGEAPTAAGAAAEG 183