Pairwise Alignments

Query, 446 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 453 a.a., reverse transcriptasematurase from Sinorhizobium meliloti 1021

 Score = 61.2 bits (147), Expect = 6e-14
 Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 47/352 (13%)

Query: 36  AVGRDGVRVEKFAEKLNDEVALIVRKASDGKYKFTKYKLKLVSKGVGKIPRVLSIPTVRD 95
           A G DG+ +E  A  L      I  +   G Y+    +   + K  G   R L IPTV D
Sbjct: 68  AAGADGLSIEATAAHLRTSWPDIRERVLAGTYRPMPVRRVTIPKPDGG-ERELGIPTVTD 126

Query: 96  RLALRAMCEFLSTIFPDAVTKKPHSY------IKAIRESLNSLDDS-AVFLRIDVKDYYP 148
           RL  +A+ + L  +   A ++  H +        A+ E+ + +     + + +D++ ++ 
Sbjct: 127 RLIQQALLQVLQPLLDPAFSEHSHGFRPGRSAHDAVLEAQSYVQSGRRIVVDVDLEKFFD 186

Query: 149 SIDRTVLESIIRKRIRKRQARDIIMAAVSTTTTGGDDSGI--------PQGLSISNILAG 200
            ++  +L   + KRI  R+   +I A ++   +G  D G+        PQG  +S +LA 
Sbjct: 187 RVNHDILIDRLSKRISDRRVIRLIRAYLN---SGIMDHGVVQERVMGTPQGGPLSPLLAN 243

Query: 201 IYLRDFDIYAEGRWKYF-RYVDDILIICKDTNEADKAYQEISKKLLAEKKLQCHPISENG 259
           + L + D   E R   F RY DD    C     + KA + +   LL     + H     G
Sbjct: 244 VLLDEVDKELERRGHCFVRYADD----CNVYVGSRKAGERV-MALLRRLYGRLHLTINEG 298

Query: 260 KSCIKKVTDGVDYLGYTVSKNMISVREASYK--------NIFPKILSVLTYHRHHKDEAK 311
           KS +  V  G  +LG++  +     R+ + K        N F + +  LT     +  A+
Sbjct: 299 KSAVTSVF-GRKFLGFSFWRG----RDGAVKRRVADKPLNAFKRRVRQLTRRSGGRSMAE 353

Query: 312 LIWRLNLKISGCIFNGKNFGWMFFFMQTKNTSQLVNLDRFVKSQLSKRGLDH 363
           +  RL + +          GW  +F   +       L+ +++ ++    L H
Sbjct: 354 VAERLRVYV---------LGWKAYFRLAQTPRLFKELEEWMRHRVRAIQLKH 396