Pairwise Alignments

Query, 464 a.a., Response regulator PleD from Azospirillum sp. SherDot2

Subject, 300 a.a., response regulator receiver modulated diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (372), Expect = 4e-40
 Identities = 98/301 (32%), Positives = 162/301 (53%), Gaps = 16/301 (5%)

Query: 154 ERASVLVLEDSALDLEKITDTLERDHNTVTSADTCAKALERALGNPLDLVVVSLTLLNED 213
           E++ VLV++D   ++  +   L ++   V +AD+  + L  A   P D++++ + +   D
Sbjct: 3   EQSVVLVVDDVKTNVLIMRQCL-KEMFQVWTADSGEECLRVAKQKP-DIILLDVLMPGMD 60

Query: 214 GLRLCSQLRSHERTRQVPILLMVDDGDLGQVAKGLELGANDYVIKPVDRNELLARARTQI 273
           G ++C QL++   T ++PI+ +          KGLE+GA DY+ KP+    + AR  T I
Sbjct: 61  GYQVCRQLKADPETAEIPIIFVTAKDSDDDEQKGLEIGAVDYITKPIRPAIVRARVSTHI 120

Query: 274 RRKRYQERLRSNYEQSLSMALTDSLTGVFNRRYVNAHLPRLLERAIDSHKPVSVLMFDID 333
           + K++ ++L+        MAL D LTG++NR ++     + L   +   + +S++M D+D
Sbjct: 121 QLKQHSDKLKF-------MALHDQLTGLYNRHFLAERAAQSLSAMVRHQQELSIVMLDLD 173

Query: 334 HFKVVNDTYGHAIGDEVLREVSARASRNLRTFDLVARLGGEEFIVILPDTDGEAALIVAE 393
           HFK +ND  GH IGD VL+ V+       R  D+VAR+GGEEF VIL +   + A    E
Sbjct: 174 HFKKINDFNGHHIGDLVLQAVAKLLQDCFRKEDVVARMGGEEF-VILMECGLDIAREKTE 232

Query: 394 RLRSRIADFPFAVSADRGEINVTVSIGISIGGRLGDTAEGLVRRADEALYEAKRSGRNCV 453
            +R ++A        +   + VT S G+            L+  ADEA+Y+AK  GRNCV
Sbjct: 233 DVRQQLA------RLNPMGLEVTGSFGVVTANPQNAELSHLLVLADEAVYKAKADGRNCV 286

Query: 454 I 454
           +
Sbjct: 287 V 287



 Score =  113 bits (282), Expect = 1e-29
 Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 9/176 (5%)

Query: 5   VLVVDDVLPNVKLLAAKLTREYFNVLTAFNGPDALEMVRKESPDIVLLDVMMPGMDGFEV 64
           VLVVDDV  NV L+  +  +E F V TA +G + L  V K+ PDI+LLDV+MPGMDG++V
Sbjct: 7   VLVVDDVKTNV-LIMRQCLKEMFQVWTADSGEECLR-VAKQKPDIILLDVLMPGMDGYQV 64

Query: 65  CEKIRSDPATMHIPVVMVTALSDIADRVRGLEAGADDFLTKPVNDIALFARVRSLVRLKM 124
           C ++++DP T  IP++ VTA     D  +GLE GA D++TKP+    + ARV + ++LK 
Sbjct: 65  CRQLKADPETAEIPIIFVTAKDSDDDEQKGLEIGAVDYITKPIRPAIVRARVSTHIQLKQ 124

Query: 125 MMDEWR---LRETTSGQFG---VIERSGTMLSESFERASVLVLEDSALD-LEKITD 173
             D+ +   L +  +G +    + ER+   LS        L +    LD  +KI D
Sbjct: 125 HSDKLKFMALHDQLTGLYNRHFLAERAAQSLSAMVRHQQELSIVMLDLDHFKKIND 180