Pairwise Alignments

Query, 357 a.a., Flagellar motor switch protein FliM from Azospirillum sp. SherDot2

Subject, 322 a.a., Flagellar motor switch protein FliM from Pseudomonas syringae pv. syringae B728a

 Score =  142 bits (358), Expect = 1e-38
 Identities = 87/321 (27%), Positives = 169/321 (52%), Gaps = 10/321 (3%)

Query: 38  VLNQDEIDSLL-GFDQGGAGDGDNSGIMALVNSALVNYERL-----PMLEVVFDRLVRMM 91
           +L+QDEID+LL G D G     +NS   ++ +  L + +R+     P LE++ +R  R  
Sbjct: 6   LLSQDEIDALLHGVDDGMVQTDNNSEPGSVKSYDLTSQDRIVRGRMPTLEMINERFARYT 65

Query: 92  STSLRNFTSDNVEVSLDQISSVRFGDYLNSIPLPAMLSVFKAEEWDNYGLMVVDSALIYS 151
             S+ N    + +V++  +  ++FG+Y++S+ +P  L++ K +      L ++D+ L++ 
Sbjct: 66  RISMFNLLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLAKIKPLRGTALFILDAKLVFK 125

Query: 152 IVDVLLGGRRGTAAMRIEGRPYTTIERNLVERMVHVVLSDLSAAFDPLSPVTFRFDRLET 211
           +VD   GG    A  +IEGR +T  E  +V  ++     DL  A+  +  V F +   E 
Sbjct: 126 LVDNFFGGDGRHA--KIEGREFTPTELRVVRMVLDQAFVDLKEAWQAIMEVNFEYINSEV 183

Query: 212 NPRFATIARPANAAVLVKLRIDMEDRGGRLELMIPYATLEPVRELLLQMFMGEKFGRDSI 271
           NP  A I  P+ A V+    I+++  GG L + +PY+ +EP+RE+L   F  +   +D  
Sbjct: 184 NPAMANIVGPSEAVVISTFHIELDGGGGDLHVTMPYSMIEPIREMLDAGFQSDLDDQDER 243

Query: 272 WETHLASELMVTDVDLSAVLDEVTMTLHDVLNWRVGTRILLNATPDGAIELRCGDVSMFQ 331
           W   L  +++  +V L+  + +  + L D+L+ R G  I +  +   ++ +R   V  F+
Sbjct: 244 WVNALKEDVLDVNVPLTTTIAQRQLPLRDILHMRPGDVIPVELS--DSLVMRANGVPSFK 301

Query: 332 GRMGRKGGHIAVRLEKELPKQ 352
            ++G   G +A+++ + + ++
Sbjct: 302 VKLGSHKGKMALQVIEPIARR 322