Pairwise Alignments

Query, 285 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 436 a.a., transcriptional regulator, AraC family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 45/116 (38%), Positives = 69/116 (59%)

Query: 4   QEYDERFTRLFDYIDQNLEGDLSLDRLSDVACLSKFHFHRLFSAHFDISVGKYIQLARLK 63
           + Y+ R  R+ DYI  +   D +LD L+  A  S FHFHR+F+     ++  +I+  R+ 
Sbjct: 69  RRYEARINRVIDYIVADPARDFTLDELAGAAPFSPFHFHRIFAGLVGETLHAFIRRLRMD 128

Query: 64  RASFRLAFNPADKVIDIALDAGFETPESFSRAFRKTFGQTPSTFRKTPEWRQWHDR 119
           RA+  LAF PA  V D+A+D GF + ++F+RAFR+ F  TPS +R+   +    DR
Sbjct: 129 RAANMLAFAPALSVTDVAMDCGFSSSQNFARAFRERFDMTPSEYRRRRHYLTGADR 184



 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 6/152 (3%)

Query: 127 RIRTMDVSIVDFAPVQVAAYCHRGPI--EDVNDSVRIFIDWRKTSGLSPRDRCRTFGVAF 184
           R   M+V + +    +VA   H GP   E +       + W    GL  R     FGV++
Sbjct: 272 RSDVMNVEVAERPACRVAYLRHIGPYASETIGPVWGRLMAWAGQRGLM-RPGVPGFGVSW 330

Query: 185 DNPETTEPADFRFDICGEIDGEVPE---NPQGVVKKLIPGGRCAVVRHRGSHEQIGEVVR 241
           DNPE T P + R+D C  I  EV        G+  + +PGG  A  R   S         
Sbjct: 331 DNPEVTPPENCRYDACIAIGPEVDALELAEAGISVQTLPGGLYAEYRSMISCNGFFRAWN 390

Query: 242 FLYGRWLPESGEELRDFPVYFHYLNFIGETAE 273
            +Y +WLP SG +  D P Y  Y + +G  AE
Sbjct: 391 DMYTQWLPASGWQCDDRPGYELYHDMLGCPAE 422