Pairwise Alignments

Query, 581 a.a., Long-chain-fatty-acid--CoA ligase from Azospirillum sp. SherDot2

Subject, 583 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  420 bits (1080), Expect = e-122
 Identities = 229/569 (40%), Positives = 332/569 (58%), Gaps = 18/569 (3%)

Query: 17  NVAADDAAHPWLTHYPNGIAWDQQFTPMPLHMLFEEAAGRYADRPCLDFMGRRYSYAEVL 76
           N +AD    PWL  Y  G+  +  +   PL  L + AA R   R  + F   R SYA++ 
Sbjct: 5   NTSAD---FPWLASYDAGVPANISYETFPLFTLLDRAAERTPRRTAIAFRNYRISYAKLR 61

Query: 77  DLVNRAARGFQDLGVGPGVRVGLCLPNCPTYVISYFAVLKAGGTVVNYNPLYVERELEHQ 136
            L    A   +  GV  G +V + LPN P  VI+++AVLKAGG VV  NPLY+E+EL HQ
Sbjct: 62  QLAEVMAANLRAQGVRRGDKVSIMLPNLPQTVIAFWAVLKAGGVVVMTNPLYMEKELVHQ 121

Query: 137 ITDSQTEIMVTLDLKQIYPRVAAMLARTPMKRIVVCRMATILPAVKKAL--FSVLKRGEL 194
           I DS    M+ LDL  ++P++  +  +  + +  + R+   L      L  F   + G  
Sbjct: 122 IHDSGARFMIALDL--VWPKIEPLREKLGIDKYFLTRIGDGLAFPLNFLYAFKAKREGTW 179

Query: 195 AVVPRDDRHV-DFGSLLTNDGKLRPVRIDGLRDVAVLQYTGGTTGVPKGAMLTHHNLLSN 253
             +P D RHV  + +LL    +      +   D+AVLQYTGGTTG+ KG MLTHHN+  N
Sbjct: 180 RELPFDGRHVLPWKTLLKGKVRHSTTTCNPTEDLAVLQYTGGTTGISKGVMLTHHNMSVN 239

Query: 254 ARQVQAWFPTVALGQER-----MLAVLPFFHVFAMTVVLNMGLACGAELIMLPRFETEQV 308
            +Q+     T  LG  R      L ++P+FHV+ +T  L +  A  A ++  PR+    V
Sbjct: 240 VQQI-----TTILGDARDMDHCFLGLMPYFHVYGLTTCLTLPTALAATIVPFPRYVPRDV 294

Query: 309 LKTIAKRKPTLVPGVPTMYKALLGHPQVARYPMTSIRYCISGGAPLPMELKRQFETATGC 368
           L  I K KPT+ PG P++Y +L+   +V  Y +TSIRYCISG AP+P+E  ++F   TG 
Sbjct: 295 LVGIQKHKPTIFPGAPSIYISLMQQKEVGDYDLTSIRYCISGSAPMPVEHIKRFRELTGA 354

Query: 369 VLIEGYGLSEASPVCAANPLSGVNKEGSIGLPLPGISIEIRDLEDPTRKLGIGEKGQVAI 428
            +IEG+GL+EASPV   NP+ GV+K GSIG+P P     I D+E     L  G+ G++ I
Sbjct: 355 QVIEGFGLTEASPVTHLNPIHGVSKTGSIGIPFPDTEARIVDMEVGQVPLPAGKVGELII 414

Query: 429 VGPNVMAGYWGRAEESDRTVIDGFLLTGDVGTMDQDGYVFLLDRLKDLIICSGYNVYPRM 488
            GP VM GYW R +E+  T+ +G+L TGD+  MD+DGY  ++DR KD+ +  GYNVYPR 
Sbjct: 415 RGPQVMKGYWNRPDETANTLRNGWLYTGDIAIMDEDGYFTIVDRKKDMFLVGGYNVYPRE 474

Query: 489 IEEAIYQHPDVVAACVIGLPDDYRGQTPKAFVQLKPGASMTVEALRDFLRDKISRIEMPT 548
           I+E +++HP +  A  +G+P   RG+  KAFV +KPG  +T   +    R+K++  ++P 
Sbjct: 475 IDEVLHEHPKIKEAVTVGVPHPTRGEMIKAFVVVKPGEKLTKAEVVAHCREKLASYKVPK 534

Query: 549 AIEFREELPKTAVGKLSKKELIAEAQQAL 577
            +EFR++LPKT VGK+ ++ L  E ++ L
Sbjct: 535 QVEFRDDLPKTVVGKVLRRILRTEEEEKL 563