Pairwise Alignments
Query, 581 a.a., Long-chain-fatty-acid--CoA ligase from Azospirillum sp. SherDot2
Subject, 583 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Score = 420 bits (1080), Expect = e-122 Identities = 229/569 (40%), Positives = 332/569 (58%), Gaps = 18/569 (3%) Query: 17 NVAADDAAHPWLTHYPNGIAWDQQFTPMPLHMLFEEAAGRYADRPCLDFMGRRYSYAEVL 76 N +AD PWL Y G+ + + PL L + AA R R + F R SYA++ Sbjct: 5 NTSAD---FPWLASYDAGVPANISYETFPLFTLLDRAAERTPRRTAIAFRNYRISYAKLR 61 Query: 77 DLVNRAARGFQDLGVGPGVRVGLCLPNCPTYVISYFAVLKAGGTVVNYNPLYVERELEHQ 136 L A + GV G +V + LPN P VI+++AVLKAGG VV NPLY+E+EL HQ Sbjct: 62 QLAEVMAANLRAQGVRRGDKVSIMLPNLPQTVIAFWAVLKAGGVVVMTNPLYMEKELVHQ 121 Query: 137 ITDSQTEIMVTLDLKQIYPRVAAMLARTPMKRIVVCRMATILPAVKKAL--FSVLKRGEL 194 I DS M+ LDL ++P++ + + + + + R+ L L F + G Sbjct: 122 IHDSGARFMIALDL--VWPKIEPLREKLGIDKYFLTRIGDGLAFPLNFLYAFKAKREGTW 179 Query: 195 AVVPRDDRHV-DFGSLLTNDGKLRPVRIDGLRDVAVLQYTGGTTGVPKGAMLTHHNLLSN 253 +P D RHV + +LL + + D+AVLQYTGGTTG+ KG MLTHHN+ N Sbjct: 180 RELPFDGRHVLPWKTLLKGKVRHSTTTCNPTEDLAVLQYTGGTTGISKGVMLTHHNMSVN 239 Query: 254 ARQVQAWFPTVALGQER-----MLAVLPFFHVFAMTVVLNMGLACGAELIMLPRFETEQV 308 +Q+ T LG R L ++P+FHV+ +T L + A A ++ PR+ V Sbjct: 240 VQQI-----TTILGDARDMDHCFLGLMPYFHVYGLTTCLTLPTALAATIVPFPRYVPRDV 294 Query: 309 LKTIAKRKPTLVPGVPTMYKALLGHPQVARYPMTSIRYCISGGAPLPMELKRQFETATGC 368 L I K KPT+ PG P++Y +L+ +V Y +TSIRYCISG AP+P+E ++F TG Sbjct: 295 LVGIQKHKPTIFPGAPSIYISLMQQKEVGDYDLTSIRYCISGSAPMPVEHIKRFRELTGA 354 Query: 369 VLIEGYGLSEASPVCAANPLSGVNKEGSIGLPLPGISIEIRDLEDPTRKLGIGEKGQVAI 428 +IEG+GL+EASPV NP+ GV+K GSIG+P P I D+E L G+ G++ I Sbjct: 355 QVIEGFGLTEASPVTHLNPIHGVSKTGSIGIPFPDTEARIVDMEVGQVPLPAGKVGELII 414 Query: 429 VGPNVMAGYWGRAEESDRTVIDGFLLTGDVGTMDQDGYVFLLDRLKDLIICSGYNVYPRM 488 GP VM GYW R +E+ T+ +G+L TGD+ MD+DGY ++DR KD+ + GYNVYPR Sbjct: 415 RGPQVMKGYWNRPDETANTLRNGWLYTGDIAIMDEDGYFTIVDRKKDMFLVGGYNVYPRE 474 Query: 489 IEEAIYQHPDVVAACVIGLPDDYRGQTPKAFVQLKPGASMTVEALRDFLRDKISRIEMPT 548 I+E +++HP + A +G+P RG+ KAFV +KPG +T + R+K++ ++P Sbjct: 475 IDEVLHEHPKIKEAVTVGVPHPTRGEMIKAFVVVKPGEKLTKAEVVAHCREKLASYKVPK 534 Query: 549 AIEFREELPKTAVGKLSKKELIAEAQQAL 577 +EFR++LPKT VGK+ ++ L E ++ L Sbjct: 535 QVEFRDDLPKTVVGKVLRRILRTEEEEKL 563