Pairwise Alignments

Query, 563 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 716 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  299 bits (766), Expect = 2e-85
 Identities = 204/562 (36%), Positives = 319/562 (56%), Gaps = 14/562 (2%)

Query: 7   LSVKSRTLLAILTLLVCTAGL-GIFSLIKLSTINEEAADVRDNWLPSVSAISRLYTTFDY 65
           L ++  T++A+  +++   G  GIF++  +    +   + R   L  ++AI+      D 
Sbjct: 164 LRLRLTTMVAVQAVIMMIIGAAGIFAVHNMDQRLQSVYEDRAVPLGQLTAINE--RLLDD 221

Query: 66  YRTLEGAHLIASTDEDIRSEDKALLESADRIEQRRMDYQKLLTPGWETETYQKFVTSYQT 125
              L GA + A   + IR     +  + +R +Q   DY        E      F  + Q 
Sbjct: 222 AMALRGAVVRAKVGKQIRDVAGRIAANRERSDQLFADYTATRLTAGEKAVADAFSAARQA 281

Query: 126 YMKISREQLLPLSRKNDNDGAGAIYRGLSRDEFRTSKELLQSLMDFNAAEGKRAADRGEQ 185
           Y        + +    + D  G +  G + D FR +K  L  L+       +     G++
Sbjct: 282 YFDEVVGPGVGMVAAREFDRLGELMTGRAEDLFRAAKTELDKLVALQVQGARDEYSSGQR 341

Query: 186 VYRTSKLWVTAILVLVVAICVGVAWMIVNT--VIRPIQTITSMMGRLADR--DMTVSIDG 241
            Y T  +   +I +L++ + +GV   +  T  +  P++ + ++M  +A    D  V I+ 
Sbjct: 342 EYVT--MLAISITLLLIGLFLGVLNGVFTTRAITVPLRRLNTVMSNIAQGKFDSRVVIE- 398

Query: 242 TDRADELGAMARAVQVFKDNMIEADRLAAAEAAEQQAKTRRAQAVERLLTGFENSSTAAL 301
             R DE G   R +Q  + N +   R    +AA++ A  R+   ++ L   FE +    +
Sbjct: 399 --RDDEAGVALRNIQAMQ-NQLFFSREEEKDAAQRTALQRKLDMLQ-LANEFEAAVGEII 454

Query: 302 RTVAAAASELDATAHSMSAMAQQTSTQATVVASAAEQTSANVQTVATATEEMASSIREIG 361
            TV++A++EL+A+A S+++ A+++      VA+A+EQ ++NVQ+VA+ATE+M+SS+ EI 
Sbjct: 455 ETVSSASTELEASASSLTSTAERSRELTVTVAAASEQAASNVQSVASATEQMSSSVSEIS 514

Query: 362 TQIARSADIAGKAVSEASQTSDAVRSLAEAAQKIGEVVGLITDIASQTNLLALNATIEAA 421
            Q+  SA IA ++V++A  T+D V  L++AA +IG VV LI +IA QTNLLALNATIEAA
Sbjct: 515 RQVQESARIAVESVNQARHTNDRVSELSQAAGRIGAVVELINNIAGQTNLLALNATIEAA 574

Query: 422 RAGEAGKGFAVVASEVKSLAGQTAKATEEIASQIGAIQQTTQGVVTAITGIGGTIGSIND 481
           RAGEAG+GFAVVA EVK LA QTAKAT +I+ QI  IQ  T+  V AI  IG TI  + +
Sbjct: 575 RAGEAGRGFAVVAQEVKILAEQTAKATGDISQQISGIQAGTEESVAAIRQIGITIDRMAE 634

Query: 482 ITTAIAAAIEEQGAATNEISRNVQQAATGTQEVTTSIVQVTQAAGEAGDAAGQVLSAAGD 541
           I + +A+A+EEQGAAT EI+RNVQQAA GT +V+++I  V Q A E G A+ QVL+AA  
Sbjct: 635 IASTVASAVEEQGAATQEIARNVQQAAHGTIQVSSNIASVRQGAAETGSASSQVLAAAQA 694

Query: 542 LSQQAELMRRDVEKFLSDIKAA 563
           LS  +  ++ +V +FLS ++AA
Sbjct: 695 LSHDSNRLKTEVSRFLSTVRAA 716