Pairwise Alignments

Query, 399 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  397 bits (1020), Expect = e-115
 Identities = 209/382 (54%), Positives = 274/382 (71%), Gaps = 5/382 (1%)

Query: 21  LSDPTFRAIVYQILVVGAVVLVGWFLISNTLDNLARRSIATGYHFLEREAAFGIGESLID 80
           L +PTFR++V+Q+L V  +    + +++N L NL  R IATG+ FLE+ A FGI +SLI 
Sbjct: 22  LYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIP 81

Query: 81  YSPKDSYGRAFLVGVLNTLKVSIIGVILATIIGTIIGVARLSSNWLIAKLASTYVEIIRN 140
           Y    SYGR FLVG+LNT  VS++G++LATI+G +IG+ARLSSNWLI++LA+ Y+E  RN
Sbjct: 82  YDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRN 141

Query: 141 IPPLLQLFFWYALVSDGLPPVRQALNPIPGVFLSQRGLRV--PVPAPDPVWTNMGIALLV 198
           +P LLQ+FFWY +V   LP  R++++     +L+ +GL +  P+     +W    +AL+ 
Sbjct: 142 LPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVL--VALIA 199

Query: 199 GIVAAWGVSRWARARQARTGQPFPAGWAGLGLIVGLPVLTWLAGGAPLAMDVPKLAGFNF 258
           GI+A W +S WA  RQ  TGQ  P G   L L V  PVL +   G P+  + P L GFNF
Sbjct: 200 GIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNF 259

Query: 259 TGGASISPEFFAILTGLTLYTAAFIAEVVRSGIKAVNWGQTEAARALGLPGSPTLRLVIL 318
            GG S+ PE  A+L  LT+YTA+FIAE+VRSGI AV+ GQTEAA +LGL  + TL+LVI+
Sbjct: 260 QGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVII 319

Query: 319 PQALRVIVPPLTSQYLNLTKNSSLALAIGYPDLVSI-ANTTLNQTGQAIEGVTMIMGTYL 377
           PQALR+I+PPLTSQYLNLTKNSSLA+AIGYPDLVS+ A TTLNQTGQAIE ++M M  YL
Sbjct: 320 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYL 379

Query: 378 VISLSISIFMNWYNKRIALVER 399
            +SL  S  MN YN+++ALVER
Sbjct: 380 TLSLLTSALMNLYNRKVALVER 401