Pairwise Alignments

Query, 342 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score = 77.0 bits (188), Expect = 9e-19
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 21/276 (7%)

Query: 72  GSGVVIDGS-GLILTIGYTVMEASQIQVIAADGRSYPANMVAYDPVSGFGLLRAEMGFSA 130
           GSGV+I+   G ++T  + +  A +I+V   DGR + A +V  D +S   LL+     + 
Sbjct: 93  GSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKAKNL 152

Query: 131 PWLRLAGTGAVKEGDTLLALSGGGNRGATAVK-VVGKREFAGYWEYLLDEALFTFPPIRA 189
             +R+A +  ++ GD  +A+      G T    +V     +G      +  + T   I +
Sbjct: 153 TEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAAINS 212

Query: 190 FN-GAALVNREGRLVGIGSLLVAEAVEGRGLPGNMFVPVSALEPILADLLAYGRRQEPAR 248
            N G ALVN  G L+GI + ++     G  +     +P + ++ +   +L +G   E  R
Sbjct: 213 GNSGGALVNLNGELIGINTAILGP--NGGNVGIGFAIPSNMMKNLTDQILEFG---EVKR 267

Query: 249 PWLGVTLREEMGRL------------LVEKVSPRSPAESAGLRPGDWIVGVGGQRFNGLA 296
             LGV   E    L             V +V P S A+ AG++ GD I  + G++ +  +
Sbjct: 268 GMLGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFS 327

Query: 297 DFYRKLWGLGPAGIVVPLEVMRGSTLTPVPVTSADR 332
           +   K+  LG AG  + L V+R      + VT  ++
Sbjct: 328 ELRAKVATLG-AGKTITLGVLRDGKNQNIDVTLGEQ 362



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 264 VEKVSPRSPAESAGLRPGDWIVGVGGQRFNGLADFYRKLWGLGPAGIVVPLEVMRG 319
           V +V   S AES  L+  D I+GV  +R   +A+  R +    P   ++ L + RG
Sbjct: 395 VTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAEL-RAIMEKSPN--ILALNIQRG 447