Pairwise Alignments

Query, 342 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 450 a.a., serine protease, HtrA/DegQ/DegS family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 22/272 (8%)

Query: 72  GSGVVIDGS-GLILTIGYTVMEASQIQVIAADGRSYPANMVAYDPVSGFGLLRAEMGFSA 130
           GSGV+ID   G I+T  + +  A  IQV   DGR   A ++  D  S   LL+ E   + 
Sbjct: 92  GSGVIIDADKGYIVTNNHVIDGADDIQVGLHDGREVKAKLIGTDSESDIALLQIEAK-NL 150

Query: 131 PWLRLAGTGAVKEGDTLLALSGGGNRGATAVK-VVGKREFAGYWEYLLDEALFTFPPIRA 189
             ++ + +  ++ GD  +A+      G T    +V     +G    +L+  + T   I +
Sbjct: 151 VAIKTSDSDELRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLGIEMLENFIQTDAAINS 210

Query: 190 FN-GAALVNREGRLVGIGSLLVAEAVEGRGLPGNMFVPVSALEPILADLLAYGRRQEPAR 248
            N G ALVN +G L+GI + +VA    G  +     +P + ++ ++A +  +G   E  R
Sbjct: 211 GNSGGALVNLKGELIGINTAIVAP--NGGNVGIGFAIPANMVKNLIAQIAEHG---EVRR 265

Query: 249 PWLGVTLREEMGRL------------LVEKVSPRSPAESAGLRPGDWIVGVGGQRFNGLA 296
             LG+  R+   +L             V +VS  S AE AG++ GD IV V G+      
Sbjct: 266 GVLGIAGRDLDSQLAQGFGLDTQHGGFVNEVSAGSAAEKAGIKAGDIIVSVDGRAIKSFQ 325

Query: 297 DFYRKLWGLGPAGIVVPLEVMRGSTLTPVPVT 328
           +   K+  +G AG  V L ++R      V VT
Sbjct: 326 ELRAKVATMG-AGAKVELGLIRDGDKKTVNVT 356



 Score = 27.7 bits (60), Expect = 6e-04
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 252 GVTLREEMGRLLVEKVSPRSPAESAGLRPGDWIVGVGGQRFNGLADFYRKLWGLGPAGIV 311
           G +L      + +  V+  SPA  +GL+ GD IVG+       L      L     A   
Sbjct: 377 GASLENASKGVEITDVAQGSPAAMSGLQKGDLIVGINRTAVKDLKSLKELLKDQEGA--- 433

Query: 312 VPLEVMRGSTL 322
           V L+++RG ++
Sbjct: 434 VALKIVRGKSM 444