Pairwise Alignments

Query, 346 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 340 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 29/279 (10%)

Query: 20  AASTAAVM--PGTAHAADPVKLEIGYIPILAASPLFIVDGQGWAKDAGIALKLTRFESGP 77
           AA+ AA++   G A A   V + IG    L   P  +    G    AG+A++L   + G 
Sbjct: 9   AAALAAILLTAGAAQAQSKVTIAIGGGACLCYLPTVLAKQLGEYDKAGLAVELVDLKGGS 68

Query: 78  HAIQAMAAGQIDLLYAGVAPVLVARTKGAEISVIANSAVEEMVVAARGP---FAKAVGTT 134
            A++A+  G  D++       +    K  E+        +  VV  R P    A + G T
Sbjct: 69  DALKAVLGGSADVVSGYFDHTVNLAAKKQEM--------QSFVVYDRYPGLVLAVSPGHT 120

Query: 135 PTAESFKKFVADTGRKPKIGTQPPGSVPDTVLKHWLFKVVKVDPADVELVPMGIEKTQ-Q 193
              +S K+         K+G   PGS  D  LK +L K   VDP +V +V +G+  T   
Sbjct: 121 AEIKSIKELAGK-----KVGVSAPGSSTDFFLK-YLLKKNGVDPNNVAVVGVGLGATAVA 174

Query: 194 ALLAGALDAATIREPTVTVTQQMDPNVVLLA-------TGAQMFPDQPGTVVSARAEVLK 246
           A+  G +DAA + +P VT+ Q    ++ +L+       T      D PG  + A    +K
Sbjct: 175 AMQQGQIDAAVMLDPAVTILQAAHADLRILSDTRTEHDTREVFGGDYPGGALYATTAWIK 234

Query: 247 KNPDAIKALVKAHIRAVDLIVKDPAG--SAKIVNNYLGK 283
            +P+  + L KA +  ++ I    A   + K+  N +GK
Sbjct: 235 AHPNEAQGLTKAILGTLNWIHAHSAEEIADKMPANIVGK 273