Pairwise Alignments

Query, 490 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  134 bits (336), Expect = 1e-35
 Identities = 86/266 (32%), Positives = 138/266 (51%), Gaps = 15/266 (5%)

Query: 226 IIFVNTRFAELIGLPREKLIGSRARDYYLDSHQRLRVLERLRG--GGGVTNMEVQFRRAD 283
           II VN  F  L G   E + G +   +    H+    ++  +     GV   EV  +R D
Sbjct: 376 IIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKD 435

Query: 284 GSPFWTLFTVNQAVIQGTAVN--LAWIYDYTERRSMEEALRDMASRDPLTGIFNRRSFMD 341
           G     +  +     +   +   +A   D + R+++E  LR+++ +D LT ++NRR F  
Sbjct: 436 GESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQ 495

Query: 342 MARAQLARAHRFHEPLS--VFVLDVDHFKRINDSFGHATGDDALRMVAAGCQAILREYDI 399
               + A+  R+ +     + ++D+DHFKRIND FGH  GD  LR VA G Q  LRE D 
Sbjct: 496 TISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDF 555

Query: 400 LGRLGGEEFVVVLPGATADESRVVAERVRRHLARMPIEAPDGTFRLTVSIGIAGLEGATD 459
           + R+GGEEF ++ P  + +E+  V  RVR H+A +  +      ++T+S G+  +  + D
Sbjct: 556 IARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQ------QVTLSGGVTDVCTSPD 609

Query: 460 TLERAIHRADLALYRAKHLGRNLVAV 485
              ++  RADLALY +K  GRN ++V
Sbjct: 610 ---QSYKRADLALYESKTSGRNQISV 632