Pairwise Alignments

Query, 527 a.a., Periplasmic serine endoprotease DegP from Azospirillum sp. SherDot2

Subject, 366 a.a., peptidase from Azospirillum brasilense Sp245

 Score =  292 bits (748), Expect = 1e-83
 Identities = 168/382 (43%), Positives = 241/382 (63%), Gaps = 24/382 (6%)

Query: 21  RKAGVRPLVAAIVWGMTSVMAGGAVMGGIAAA-PAQAQAATPNRNAPGSFADLAEKLLPA 79
           R A +R   AA V G+  +   GA +   AAA PA     T       + A + E++ PA
Sbjct: 6   RFAALRFAGAACVAGLLGIGVPGAGLAPAAAALPAGVTGVT-------TIAPMLEQVTPA 58

Query: 80  VVNISTSQNAPQRPQGQRPEIPQFPPGSPFEDFFKDFFDRQQQQDQPQRKATSLGSGFII 139
           VVNI+    APQ    + P +         + FF+ FF+  +QQ +PQ    S GSG I+
Sbjct: 59  VVNIAVLSRAPQ---AENPLLR--------DPFFRRFFNVPEQQARPQ---VSAGSGVIV 104

Query: 140 DAKNGYVVTNNHVVQDADEITVILQDDTNIKAELVGKDSKTDLALLKIKTSHPLVAVPFG 199
           DA+ GYV+TN HVV++A EI V L+D   ++A+LVG+D+ TD+ALLKI+ +  L A+P+G
Sbjct: 105 DARRGYVITNAHVVENAQEIAVTLKDRRRLRAKLVGRDAATDIALLKIE-AEKLTALPWG 163

Query: 200 DSDAMRVGDWVLAIGNPFGLGGSVTAGIISARQRN-IDAGPYDDFLQTDASINRGNSGGP 258
           DSD ++VGD+++AIGNPFGLG +VT+GI+SA  R+ +    Y+DF+QTDASIN GNSGG 
Sbjct: 164 DSDQLKVGDFLVAIGNPFGLGQTVTSGIVSALGRSGLKIEGYEDFIQTDASINPGNSGGA 223

Query: 259 MFNLNGEVIGINTAIFSPSGGSVGIGFAIPSNLAKQVVAQLKDYGKTRRGWLGVRIQAVT 318
           + N NGE++GINTAI  P+GGSVGIGFA+P ++ + V+ QL +YG+ RRG LGV IQ +T
Sbjct: 224 LVNFNGELVGINTAIIGPAGGSVGIGFAVPVSIVRSVMEQLVEYGEVRRGRLGVSIQDLT 283

Query: 319 PEIAESLGLPGHKGALVASVTPDGPAAKGGIQAGDVVTRFDGREIDEMRRLPRVVAETSI 378
           P++A+S+ L G  GA++A V     A + G ++GDVVT  +GR +         +    +
Sbjct: 284 PDLADSMNLAGDAGAVIAQVERGSAADRAGFRSGDVVTAVNGRPVRSATDFRNRMGLVRV 343

Query: 379 DKAVPVEVWRKGKSQTVQVKVG 400
              + V V R G  + + V+ G
Sbjct: 344 GTPLQVTVLRGGSERVLNVRTG 365



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 434 LGMKLTAITPELRQQYEIKPDMKGVVITDVAGNSTAAEKGLRAGDVIIEVGQEEVRKPED 493
           LG+ +  +TP+L     +  D  G VI  V   S A   G R+GDV+  V    VR   D
Sbjct: 275 LGVSIQDLTPDLADSMNLAGDA-GAVIAQVERGSAADRAGFRSGDVVTAVNGRPVRSATD 333