Pairwise Alignments

Query, 527 a.a., Periplasmic serine endoprotease DegP from Azospirillum sp. SherDot2

Subject, 463 a.a., DegQ family serine endoprotease from Rhodopseudomonas palustris CGA009

 Score =  295 bits (754), Expect = 3e-84
 Identities = 178/430 (41%), Positives = 256/430 (59%), Gaps = 34/430 (7%)

Query: 68  SFADLAEKLLPAVVNISTSQNAPQRPQGQRPEIPQFPPGSPFEDFFKDFFDRQQQQDQPQ 127
           S+A + + + PAVVN+  ++      Q + P +         +  F+ FF    Q +Q Q
Sbjct: 37  SYAPIVQHVQPAVVNVYAAKVV----QNRNPLLE--------DPIFRRFFGVPGQPEQIQ 84

Query: 128 RKATSLGSGFIIDAKNGYVVTNNHVVQDADEITVILQDDTNIKAELVGKDSKTDLALLKI 187
           R   SLGSG ++DA +G VVTNNHV++ AD++ V L D    +AE+V KDS+TDLA+L++
Sbjct: 85  R---SLGSGVMVDA-SGLVVTNNHVIEGADQVKVALADKREFEAEIVLKDSRTDLAVLRL 140

Query: 188 K-TSHPLVAVPFGDSDAMRVGDWVLAIGNPFGLGGSVTAGIISARQRN-IDAGPYDDFLQ 245
           K TS     + F +SD + VGD VLAIGNPFG+G +VT GI+SA  R  +    Y  F+Q
Sbjct: 141 KDTSEKFPTLDFANSDDLLVGDVVLAIGNPFGVGQTVTHGIVSALARTQVGITDYQFFIQ 200

Query: 246 TDASINRGNSGGPMFNLNGEVIGINTAIFSPSGGSVGIGFAIPSNLAKQVVAQLKDYGK- 304
           TDA+IN GNSGG + +++G+++GINTAIFS SGGS GIGFAIP+N+ + VVA  K  GK 
Sbjct: 201 TDAAINPGNSGGALVDVSGKLVGINTAIFSRSGGSQGIGFAIPANMVRVVVASAKSGGKA 260

Query: 305 TRRGWLGVRIQAVTPEIAESLGLPGHKGALVASVTPDGPAAKGGIQAGDVVTRFDGREID 364
            +R WLG R+QAV+PEIAE+LGL    GALVASVT   PA + G++  D++   DG  ID
Sbjct: 261 VKRPWLGARLQAVSPEIAETLGLKRPGGALVASVTKGSPAERAGLKLSDLIVSIDGFAID 320

Query: 365 EMRRLPRVVAETSIDKAVPVEVWRKGKSQTVQVKVGELEAAEEQGLLAAGPDEKQPPKDK 424
           +        A   +  A  +EV R GK+  + +    LE A + G            +D+
Sbjct: 321 DPNAFDYRFATRPLGGAAQLEVQRSGKAVKLSI---PLETAPDSG------------RDE 365

Query: 425 APAQKPTESLGMKLTAITPELRQQYEIKPDMKGVVITDVAGNSTAAEKGLRAGDVIIEVG 484
                 +   G K+  I+P +  +  + P ++GVV+TD+  +STAA  G + GD+I+ V 
Sbjct: 366 LVITSRSPFQGAKIANISPAIADEMRLDPSVEGVVVTDLPDDSTAANVGFQKGDIIVAVN 425

Query: 485 QEEVRKPEDV 494
              + K  D+
Sbjct: 426 NTRIGKTSDL 435



 Score = 41.6 bits (96), Expect = 6e-08
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 305 TRRGWLGVRIQAVTPEIAESLGL-PGHKGALVASVTPDGPAAKGGIQAGDVVTRFDGREI 363
           +R  + G +I  ++P IA+ + L P  +G +V  +  D  AA  G Q GD++   +   I
Sbjct: 370 SRSPFQGAKIANISPAIADEMRLDPSVEGVVVTDLPDDSTAANVGFQKGDIIVAVNNTRI 429

Query: 364 DEMRRLPRVVAETSIDKAVPVEVWR----KGKSQTVQVKVG 400
            +   L RV  +T+        +WR    +G  Q +QV +G
Sbjct: 430 GKTSDLERVAGQTA-------RLWRIMLVRG-GQQIQVTLG 462