Pairwise Alignments

Query, 229 a.a., Transcriptional regulatory protein DegU from Azospirillum sp. SherDot2

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  125 bits (314), Expect = 6e-34
 Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 8/205 (3%)

Query: 3   SVRAFLIDSNKLFREGLKRLLD-DSPFQIVAEAGNLREALGSVENGIRPQLVLLDLQNGG 61
           S R  L+D + L R G+ +LL  +  F++VAEAG+  EA+ ++ + ++P L+LLDL   G
Sbjct: 2   SCRVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAI-ALAHDLQPDLILLDLNMKG 60

Query: 62  DEEADGMRRLRALLPDTRLVILTSDLCTRRLANALEAGADGYLMKDLSSDALAQSLKLVM 121
               D +  LR    D  +VILT       +   ++AGADGYL+KD   D L   LK  M
Sbjct: 61  MSGLDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAM 120

Query: 122 MGEKVFPTHLAALLISGRVNGNGTEMPVSRKGLSQREVQILRCLLNGDSNKMIANHLNIT 181
            GEK F   +   L++     N  E       L++RE+QI+  +  G  N+ IA+ L I+
Sbjct: 121 QGEKAFSESVERYLLNREHTSNPFE------ALTEREMQIMSEVAKGYRNRQIADRLFIS 174

Query: 182 EATVKVHLKSLLRKINASNRTQAAI 206
           E+TVKVH+KSLL+K++  +RT A I
Sbjct: 175 ESTVKVHMKSLLKKLDVPSRTAATI 199