Pairwise Alignments

Query, 548 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

Subject, 382 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2C3

 Score =  103 bits (258), Expect = 9e-27
 Identities = 98/385 (25%), Positives = 162/385 (42%), Gaps = 79/385 (20%)

Query: 8   RAAIFLGLALSAAAGLSAY--VVLARAEPGPAYRLARVEQGPLVSAITATGTMSALVTVE 65
           R A  L  AL  A   +A+  VV +RA        A V +G + +++TA GT+     V+
Sbjct: 8   RRAWLLTFALLPAVAFAAWQAVVPSRAP----LVTAPVTRGDIENSVTALGTLQPRRYVD 63

Query: 66  VSSQLSGQIAELYADFNSRVTSGQILARLNGDQLAARLAQAGADVDSAKAALIQQQALLD 125
           V +Q SGQI +++ +    V  GQ+L  ++     ARL      +++ KA L +Q+A   
Sbjct: 64  VGAQASGQIQKIHVEAGDEVREGQLLVEIDPSTQKARLDAGRFSIENLKAQLQEQRA--- 120

Query: 126 KARADLANANASIANADAQIVRADLAQRDAERDLWRRRDLQGRGVVAAADLEKAETAAHS 185
                                + DLAQ+   R    ++ L+  G     D++ A+    +
Sbjct: 121 ---------------------QHDLAQQKFRR----QQQLKAGGATREEDVQTAQAEVRA 155

Query: 186 AQAQLIAARAQKRQAEAAEASAEASLAVAAAQVEVARAQVAQREAALQLVRVDLNRSVIR 245
            QA+                            +++ +AQ+ Q +A+L+    +L  + I 
Sbjct: 156 TQAR----------------------------IDMFQAQIRQAQASLRSDEAELGYTRIY 187

Query: 246 SPIDGVVVNRAVSTGQTVAASLSAPTLFTIAQDLRQMEVLANIDEADIGRVREGMAVRFT 305
           +P+ G VV      GQT+ A    P +  IA+ L  M V A + EADIG V+ GM   FT
Sbjct: 188 APMSGTVVAVGAREGQTLNAQQQTPLILRIAR-LSPMTVWAEVSEADIGHVKPGMTAYFT 246

Query: 306 VNAFPGDSFTGRVAQVRLAPKE----------------DQTVVTYIVVITVENPELRLLP 349
             A     ++  V Q+   P                   + VV Y V++ V+N +  L+ 
Sbjct: 247 TLAGGSRRWSSTVRQILPVPPRPLEASQGGSPTGGRSGSERVVLYTVLLDVDNADRALMT 306

Query: 350 GMTANLRITVDERPSAVKLPNAALR 374
            MTA +     +    + +P AAL+
Sbjct: 307 DMTAQVFFVAAQAKDVLTVPIAALQ 331