Pairwise Alignments

Query, 340 a.a., Ribosomal RNA small subunit methyltransferase C from Azospirillum sp. SherDot2

Subject, 374 a.a., 50S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 13/272 (4%)

Query: 70  PAEGPFDGAVLRLPRGWAGFEMALHALASRLAPGAPLWIAGGNDEGVTSAAKHLDGLTEE 129
           P  GPFD  ++R+P+  A  E  L  L ++LAPGA +  A        +A   L+     
Sbjct: 104 PLVGPFDRVLIRVPKTLALLEEQLIRLQTQLAPGAQVVAAAMVKHLPRAAGDLLERYIGP 163

Query: 130 PETLIIKRRARLLL-TQRTDAPAKGALEDWRQTVTLTLPDRTLELVSYPGLFAHGHLDAG 188
            +  +  ++ARLL+ T     PA+            TL D  +EL+++  +F    LD G
Sbjct: 164 VQASLAVKKARLLIATADARQPAQSPYP-----TRYTLDDPAIELLNHANVFCREGLDIG 218

Query: 189 TECLLKVLPEVAAGTRVLDFGCGAGVIARAVRERQPDAPLTLLDIDAVALHAARQN---- 244
           T   L  LP+     +V D GCG GV+A A   + P A  TL+D   +A+ +A +N    
Sbjct: 219 TRAFLPHLPKNLGNAQVADLGCGNGVLAIASALQNPQAHYTLVDESFMAVQSAAENWRAA 278

Query: 245 VPDAELVL--SDGLAGLGTRERFGLILSNPPLHRGKDEDFGMLDALVAGTKQYLKLRGTL 302
           +   E+++   DGLAG    +   ++L NPP H+ +     +   +    ++ L + G L
Sbjct: 279 LGSREVIVRAGDGLAG-QEPQSLDVVLCNPPFHQQQVVGDFLAWRMFQQAREALVVGGAL 337

Query: 303 VAVTQRTAGVGKLFKAAFGHSDMLMETTQFQV 334
             V  R  G        F   + +  T +F +
Sbjct: 338 YIVGNRHLGYHSKLARLFRGVEQVAATPKFVI 369