Pairwise Alignments

Query, 340 a.a., Ribosomal RNA small subunit methyltransferase C from Azospirillum sp. SherDot2

Subject, 342 a.a., rRNA (guanine-N(2)-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  109 bits (273), Expect = 9e-29
 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 8/271 (2%)

Query: 70  PAEGPFDGAVLRLPRGWAGFEMALHALASRLAPGAPLWIAGGNDEGVTSAAKHLDGLTEE 129
           P+   FD  VL  P+  +     L+     L PG  L I G    G+ S  K L    + 
Sbjct: 72  PSTQTFDAVVLFYPKSKSLAPYLLNLAGRHLIPGGELVIVGEKKGGIRSITKQLPDYFDG 131

Query: 130 PETLIIKRRARLLLTQRTDAPAKGALEDWRQTVTLTLPDRTLELVSYPGLFAHGHLDAGT 189
              L   R   L  +       +  L DW +   L+ P   L + +  G+F+   LD GT
Sbjct: 132 GIKLDNARHCMLYSSSLLSEAPEIKLSDWVKDYVLSTPQGELTICNLVGVFSEKRLDEGT 191

Query: 190 ECLLKVLPEVAAGTRVLDFGCGAGVIARAVRERQPDAPLTLLDIDAVALHAAR----QNV 245
           E LL+ LP +    RVLDFGCGAGVI  A+ +  PD  L  +DI+A+AL +       N 
Sbjct: 192 ELLLEHLPTLKG--RVLDFGCGAGVITAALLKANPDLELECVDINAMALASCELTLAANG 249

Query: 246 PDAELVLSDGLAGLGTRERFGLILSNPPLHRGKDEDFGMLDALVAGTKQYLKLRGTLVAV 305
             A++  SDGL    T+  F  I+SNPP H G D    +    V  ++  LK  G    V
Sbjct: 250 MQAKVYASDGLT--QTQGMFDAIISNPPFHDGLDSTTEIATRFVQESEAQLKSGGIFQIV 307

Query: 306 TQRTAGVGKLFKAAFGHSDMLMETTQFQVWS 336
             R           F   ++  E  ++++++
Sbjct: 308 ANRHLPYSDTIAKFFKTVNVAAENNKYKIYA 338