Pairwise Alignments

Query, 340 a.a., Ribosomal RNA small subunit methyltransferase C from Azospirillum sp. SherDot2

Subject, 353 a.a., 16S rRNA m(2)G 1207 methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  114 bits (286), Expect = 3e-30
 Identities = 84/271 (30%), Positives = 122/271 (45%), Gaps = 8/271 (2%)

Query: 70  PAEGPFDGAVLRLPRGWAGFEMALHALASRLAPGAPLWIAGGNDEGVTSAAKHLDGLTEE 129
           P +  +D  ++  P+         +  A  L     L + G N  GV S  K L      
Sbjct: 83  PHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLLVVGENKGGVKSLVKLLPKYFAT 142

Query: 130 PETLIIKRRARLLLTQRTDAPAKGALEDWRQTVTLTLPDRTLELVSYPGLFAHGHLDAGT 189
              L   R   L  +   D   +  L DW     L+ P   + + +  G+F+  HLD GT
Sbjct: 143 GVKLDNARHCLLFGSSLIDTAPEIKLSDWTSQYQLSTPQGNITICNLVGVFSEKHLDQGT 202

Query: 190 ECLLKVLPEVAAGTRVLDFGCGAGVIARAVRERQPDAPLTLLDIDAVALHAAR----QNV 245
           E LL  LP ++   RVLDFGCGAGVIA A+ + QP   L  +DI+A+AL +       N 
Sbjct: 203 ELLLSHLPTLSG--RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANG 260

Query: 246 PDAELVLSDGLAGLGTRERFGLILSNPPLHRGKDEDFGMLDALVAGTKQYLKLRGTLVAV 305
             A++  SDGLA   T  +F  I+SNPP H G      +    VA + + L+ +G    V
Sbjct: 261 MTAKVYPSDGLA--QTSGKFDGIISNPPFHDGLASTTSIAQRFVADSAKQLQSKGIWQIV 318

Query: 306 TQRTAGVGKLFKAAFGHSDMLMETTQFQVWS 336
           T R         A FG   +  E  +++++S
Sbjct: 319 TNRHLPYSDTIAAEFGQLTVPAENNKYKLYS 349