Pairwise Alignments

Query, 331 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 327 a.a., putative branched-chain amino acid transport system, permease component from Phaeobacter inhibens DSM 17395

 Score =  161 bits (408), Expect = 2e-44
 Identities = 110/317 (34%), Positives = 163/317 (51%), Gaps = 29/317 (9%)

Query: 32  AVLVALLAVPFLLYPV---FLM----KVLCFALFACAFNLLIGFGGLLSFGHAAFFGSAA 84
           AV++ LLA+P   +     FL+    KV   AL     N+ +G GGL+S GHAAFFG   
Sbjct: 10  AVILLLLAIPLWAHMTEEPFLITLATKVAILALAGVGLNIALGIGGLVSLGHAAFFGIGG 69

Query: 85  Y----VTAHT-----VKVWGLSPE------LGILLGTAASAFLGILFGSIAIRRQGIYFA 129
           Y    + AH      +  W L  E      +  L+   ASA   ++ G++++R  G+YF 
Sbjct: 70  YAMGILAAHAQNYEPLAEWPLLIEGTNQMPVIWLVAVVASALAALVIGALSLRTSGVYFI 129

Query: 130 MITLALSQMVFFLALQLPFTHGEDGIQAVPRGVLFGVFDLNNPLAMYYTVLGVFLIGFAI 189
           MITLA  QM+++ A+      GEDG+    R    G+    N LA     L  + I  A 
Sbjct: 130 MITLAFGQMLYYFAISWSAYGGEDGLSIWVRNEFPGM----NTLAPLQFFLICYAILCAA 185

Query: 190 IW---RTVHSPFGQVLKAIRENEPRAISLGYRTERYKLMAFVLSATLAGLAGGTKAIVFQ 246
           +W   R   +PFG  L A R+ E R  ++G    + +L AFV+S  + GLAG   A + +
Sbjct: 186 LWFAARLARAPFGLALSAARQCEARVETVGITPYQLRLTAFVISGAITGLAGALFADLNR 245

Query: 247 LATLTDVTWQMSGEVVLMTLLGGMGTLTGPVIGAALVVTLENYLAATSLPVPVVIGCIFV 306
             + T ++W  SGE+++  ++GG+G L GPVIGAAL + LE+ L   S    + +G + +
Sbjct: 246 FVSPTMLSWHTSGEIMIFVIIGGVGRLFGPVIGAALFILLEHLLGGISDYWQIYLGGLLL 305

Query: 307 ACVLVFRRGIAGEIQAR 323
             VL  R G+ G I  R
Sbjct: 306 IIVLYARGGVIGAISGR 322