Pairwise Alignments

Query, 955 a.a., UvrABC system protein A from Azospirillum sp. SherDot2

Subject, 1029 a.a., Excinuclease ABC subunit A from Acidovorax sp. GW101-3H11

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 577/995 (57%), Positives = 721/995 (72%), Gaps = 59/995 (5%)

Query: 5    ISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64
            IS+RGAR HNLKN+D+D+PR++L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 36   ISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 95

Query: 65   FLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPYSPAT 124
            FL  + KPDVD IEGLSPAISIEQK TS NPRSTVGTVTEI+DY+RLL+AR G P+ P  
Sbjct: 96   FLGRLDKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPFCPDH 155

Query: 125  GLPIESQTVSQMVDRILGMPEGTRLLLLAPFVRGRKGEYKKEIQDLRKRGFQRVRVDGTM 184
            GLP+ +QTVSQMVD +L +PE T+L+++AP  R +KGE+ +    ++  G+ R RVDG +
Sbjct: 156  GLPLAAQTVSQMVDAVLALPEDTKLMVMAPVAREKKGEFTELFAQMQALGYIRFRVDGQI 215

Query: 185  YEIDEVPALNKKLKHDIEVVVDRIVVREGLGNRLADSLETALGL----ADGIVWVENAET 240
            YE + +PAL K  KHDI+VV+DR+ VR  L  RLA+S+E AL +     +G V     +T
Sbjct: 216  YEHENLPALKKTEKHDIDVVIDRVKVRADLQQRLAESIEAALRVGGNEGNGRVLALEMDT 275

Query: 241  NEQTVFSQKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGSKIYFDPMLVVPDERLT 300
              + +FS KFACPV  +++ E+EPRLFSFN+P GACPACDG+G +  FDP  VV    L+
Sbjct: 276  GLEHLFSSKFACPVCSYSLAELEPRLFSFNSPMGACPACDGMGQREVFDPARVVAFPSLS 335

Query: 301  LAKGAIAPWAGSTSKYYDQTLESICEHFDASMTTPWQDLPETVRKTILFGSDGSAITMTY 360
            LA GAI  W    + YY   LES+  H+   +  P++ LP  V+  IL GS    I  +Y
Sbjct: 336  LASGAIKGW-DRRNGYYFAMLESLARHYTFDIEAPFESLPAPVQHAILHGSGDEEIAFSY 394

Query: 361  --DDGLRR---YQTNKAFEGIVNNLERRFRETDSAWTRDELSKYQSSQPCEVCKGARLKP 415
              D G  +   +     FEGI+ N+ RR+RETDS   R++L++++S+QPC  C G RL+ 
Sbjct: 395  IMDSGASKGKVHTKKHPFEGIIPNMARRYRETDSVVVREDLARFRSTQPCPECHGVRLRR 454

Query: 416  EALAVKI----RGRNISEAAELSIAGAGAWFSELNEHLRPKDREIAYRILKEINERLGFL 471
            EA  VK+    + R I E +  +++ A AWFS L   L     EIA ++++EI  RL FL
Sbjct: 455  EARHVKVGEGTQARAIYEVSHATLSDAHAWFSAL--QLTGAKAEIADKVVREIATRLQFL 512

Query: 472  NAVGLEYLTLSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLET 531
            N VGL YL+L R + TLSGGE+QRIRLASQIGSGLTGV+YVLDEPSIGLHQRDNDRL+ T
Sbjct: 513  NDVGLSYLSLDRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIAT 572

Query: 532  LKRLRDIGNTVVVVEHDEDAIRSADYLVDMGPGAGQHGGSVIAQGTPEEVQKNPDSITAQ 591
            L+ LRDIGN+V+VVEHDED +R+AD+++DMGPGAG HGG V+AQGT +EV+ N  S+T Q
Sbjct: 573  LQHLRDIGNSVIVVEHDEDMMRAADHVIDMGPGAGVHGGRVMAQGTYDEVRANAQSLTGQ 632

Query: 592  YLNGTRFVPVPDTRRPGHP---------------------------------------GQ 612
            YL+GTR + VP  R P  P                                        Q
Sbjct: 633  YLSGTRTIAVPQRRTPWLPVLDQPAPVVETKAKSRFPQTEASKRRAERMAEHHARQGAVQ 692

Query: 613  FLEVQGARANNLQNVSTRIPLGTFTCVTGVSGGGKSTLIIETLYKAVARKLMGAREHPAE 672
             L V GA  NNL+ V+   P+G  TCVTGVSG GKSTL+ +TLY AVAR++  A E PAE
Sbjct: 693  ALRVVGATGNNLKGVTVDFPVGLLTCVTGVSGSGKSTLVNDTLYAAVARQVHRAHEEPAE 752

Query: 673  HDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPMRDWFAGLPEAKARGYGPGRFS 732
            H+ ++G+E+ DKVI++DQSPIGRTPRSNPATYTG FTP+R+  A    AK RGYGPGRFS
Sbjct: 753  HEEIVGIEYFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELMAETNTAKERGYGPGRFS 812

Query: 733  FNVK----GGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLEVTYRDKTIADV 788
            FNV     GGRCEACQGDGV+K+EMHFLPDVYV CDVCHG+RYNRETLEV ++ K IA +
Sbjct: 813  FNVSQSSGGGRCEACQGDGVVKVEMHFLPDVYVPCDVCHGQRYNRETLEVQWKGKNIAQI 872

Query: 789  LDMTVEEGKEFFKAVPGIRDKLDTLERVGLGYIHIGQAATTLSGGEAQRVKLSKELSRRA 848
            L++TVE+   +FK VP I  KL TL  VGL YI +GQAATTLSGGEAQRVKL++ELS+R 
Sbjct: 873  LELTVEDAAAYFKDVPTIARKLQTLLDVGLSYIRLGQAATTLSGGEAQRVKLAQELSKRD 932

Query: 849  TGRTLYILDEPTTGLHFADVEKLMEVLHALVDQGNTVLVIEHNLEVIKTADWIIDLGPEG 908
            TGRTLYILDEPTTGLHFAD++ L++VLH L D GNT+++IEHNL+VIKTADW+ID+GPEG
Sbjct: 933  TGRTLYILDEPTTGLHFADIDLLLKVLHQLRDAGNTIVIIEHNLDVIKTADWLIDMGPEG 992

Query: 909  GTGGGEIVAEGTPEDVAKVERSYTGRYLAPYLKAK 943
            G GGG +V  GTPE++A    S+TGRYLAPYL++K
Sbjct: 993  GAGGGTVVGVGTPEELAANPASHTGRYLAPYLQSK 1027



 Score = 58.2 bits (139), Expect = 3e-12
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 15/105 (14%)

Query: 612 QFLEVQGARANNLQNVSTRIPLGTFTCVTGVSGGGKSTLIIETLY-----------KAVA 660
           Q + ++GAR +NL+N+   IP      +TG+SG GKS+L  +TLY            A A
Sbjct: 34  QRISIRGARTHNLKNIDLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 93

Query: 661 RKLMGAREHPAEHDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYT 705
           R+ +G  + P   D  L +E L   I I+Q      PRS   T T
Sbjct: 94  RQFLGRLDKP---DVDL-IEGLSPAISIEQKATSHNPRSTVGTVT 134