Pairwise Alignments

Query, 955 a.a., UvrABC system protein A from Azospirillum sp. SherDot2

Subject, 950 a.a., excinuclease ABC, A subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1127 bits (2915), Expect = 0.0
 Identities = 573/941 (60%), Positives = 714/941 (75%), Gaps = 7/941 (0%)

Query: 5   ISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64
           I +RGAR HNLKN+++ +PRD+LIVITGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 4   IEIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63

Query: 65  FLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPYSPAT 124
           FL LM+KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TEIYDY+RLL+ARVG P  P  
Sbjct: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRCPTH 123

Query: 125 GLPIESQTVSQMVDRILGMPEGTRLLLLAPFVRGRKGEYKKEIQDLRKRGFQRVRVDGTM 184
           G P+ +QTVSQMVD++L MPE +RL+LLAP V GRKGE+ K ++ L  +G+ R R+DG +
Sbjct: 124 GQPLAAQTVSQMVDKVLEMPEDSRLMLLAPVVNGRKGEHVKLLEGLSAQGYIRARIDGEV 183

Query: 185 YEIDEVPALNKKLKHDIEVVVDRIVVREGLGNRLADSLETALGLADGIVWVENAE--TNE 242
            ++ + P L+  +KH IEVVVDR  VR  +  RLA+S ETAL L+ GI  V + +  T E
Sbjct: 184 CDLTDPPTLDLHVKHTIEVVVDRFKVRSDIQQRLAESFETALELSGGIAVVASMDEGTTE 243

Query: 243 QTVFSQKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGSKIYFDPMLVVPDERLTLA 302
           + +FS  FACP  G+++ E+EPR+FSFNNP GACP CDGLG + +FDP  V+ +  L+LA
Sbjct: 244 ELIFSANFACPHCGYSMAELEPRIFSFNNPAGACPTCDGLGVQQFFDPDRVITNPELSLA 303

Query: 303 KGAIAPWAGSTSKYYDQTLESICEHFDASMTTPWQDLPETVRKTILFGSDGSAITMTY-D 361
            GAI  W    + YY Q L S+ +H+   +  P++ L + VRK +L+GS   +I   Y +
Sbjct: 304 GGAIRGW-DRRNFYYFQMLSSLADHYKFDVEAPFEQLSDKVRKIVLYGSGKDSIAFKYIN 362

Query: 362 DGLRRYQTNKAFEGIVNNLERRFRETDSAWTRDELSKYQSSQPCEVCKGARLKPEALAVK 421
           D       N  FEGI+NN++RR+RET+S   RDEL+K+ ++Q C+ C G+RL+ EA  V 
Sbjct: 363 DRGDVVVRNHPFEGILNNMDRRYRETESNAVRDELAKFINTQACQSCGGSRLREEARHVF 422

Query: 422 IRGRNISEAAELSIAGAGAWFSELNEHLRPKDREIAYRILKEINERLGFLNAVGLEYLTL 481
           I   N+ +    SI  A  +F +L      +  +IA +ILKE+ +RLGFL  VGL YL+L
Sbjct: 423 IGDLNLPKLTVWSIGEALDYFDKLE--FTGQKAQIAEKILKEVRDRLGFLVNVGLNYLSL 480

Query: 482 SRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLETLKRLRDIGNT 541
           SR + TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL+TL  LRD+GNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLQTLIHLRDLGNT 540

Query: 542 VVVVEHDEDAIRSADYLVDMGPGAGQHGGSVIAQGTPEEVQKNPDSITAQYLNGTRFVPV 601
           V+VVEHDEDAIR AD+++D+GPGAG HGG VI  G  E++    +S+T QY++G R + +
Sbjct: 541 VIVVEHDEDAIRMADHIIDIGPGAGVHGGEVICDGPIEKIIACDESVTGQYISGKRNIHI 600

Query: 602 PDTRRPGHPGQFLEVQGARANNLQNVSTRIPLGTFTCVTGVSGGGKSTLIIETLYKAVAR 661
              R P  P Q +E+ GAR NNL+NV   IP+G FTCVTGVSG GKSTLI +T +K   +
Sbjct: 601 STPRTPFDPKQVIELYGARGNNLRNVDLTIPIGLFTCVTGVSGSGKSTLINDTFFKIAHK 660

Query: 662 KLMGAR-EHPAEHDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPMRDWFAGLPE 720
            L GA  + PA +D ++G+E  DKV+DIDQSPIGRTPRSNPATYTG FTP+R+ FAG  E
Sbjct: 661 MLNGATVDEPAPYDRIVGMEQCDKVVDIDQSPIGRTPRSNPATYTGIFTPIREIFAGTQE 720

Query: 721 AKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLEVTY 780
           ++ RGY  GRFSFNVKGGRCEACQGDG+IK+EMHFLPDVYV CD C GKRYNRETLEV Y
Sbjct: 721 SRTRGYQVGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDACKGKRYNRETLEVRY 780

Query: 781 RDKTIADVLDMTVEEGKEFFKAVPGIRDKLDTLERVGLGYIHIGQAATTLSGGEAQRVKL 840
           + K I +VL MTVE+ +EFF AVP I  KL TL  VGL Y+ +GQ+ATTLSGGEAQRVKL
Sbjct: 781 KGKNIHEVLQMTVEDAREFFDAVPAIARKLQTLMDVGLSYVRLGQSATTLSGGEAQRVKL 840

Query: 841 SKELSRRATGRTLYILDEPTTGLHFADVEKLMEVLHALVDQGNTVLVIEHNLEVIKTADW 900
           +KELS+R TG+TLYILDEPTTGLHFAD++ L++VLH L   GNT++VIEHNL+VIKTADW
Sbjct: 841 AKELSKRDTGKTLYILDEPTTGLHFADIQLLLDVLHRLKSHGNTIVVIEHNLDVIKTADW 900

Query: 901 IIDLGPEGGTGGGEIVAEGTPEDVAKVERSYTGRYLAPYLK 941
           IIDLGPEGG GGG I+A GTPEDVA    S+T R+L P L+
Sbjct: 901 IIDLGPEGGGGGGTILATGTPEDVALHPTSHTARFLKPLLE 941