Pairwise Alignments

Query, 955 a.a., UvrABC system protein A from Azospirillum sp. SherDot2

Subject, 941 a.a., excinuclease ABC subunit A from Klebsiella michiganensis M5al

 Score = 1152 bits (2981), Expect = 0.0
 Identities = 576/945 (60%), Positives = 732/945 (77%), Gaps = 15/945 (1%)

Query: 5   ISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 64
           I VRGAR HNLKN+++ +PRD+LIV+TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 4   IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63

Query: 65  FLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPYSPAT 124
           FL LM+KPDVD IEGLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLL+ARVG P  P  
Sbjct: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRCPDH 123

Query: 125 GLPIESQTVSQMVDRILGMPEGTRLLLLAPFVRGRKGEYKKEIQDLRKRGFQRVRVDGTM 184
            +P+ +QTVSQMVD +L  PEG RL+LLAP ++ RKGE+ K +++L  +G+ R R+DG +
Sbjct: 124 DVPLAAQTVSQMVDNVLSQPEGQRLMLLAPIIKERKGEHNKTLENLAGQGYIRARIDGEV 183

Query: 185 YEIDEVPALNKKLKHDIEVVVDRIVVREGLGNRLADSLETALGLADGIVWVENAETN--E 242
            ++ + P L  + KH IEVV+DR  VR+ L  RLA+S ETAL L+ G   V N +    E
Sbjct: 184 CDLSDPPKLELQKKHTIEVVIDRFKVRDDLSTRLAESFETALELSGGTAIVANMDDPKAE 243

Query: 243 QTVFSQKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGSKIYFDPMLVVPDERLTLA 302
           + +FS  FACP+ G+++ E+EPRLFSFNNP GACP CDGLG + YFDP  V+ +  L+LA
Sbjct: 244 ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPERVIQNPELSLA 303

Query: 303 KGAIAPWAGSTSKYYDQTLESICEHFDASMTTPWQDLPETVRKTILFGSDGSAITMTY-- 360
            GAI  W    + YY Q L+S+ EH++  +  PW  L  +V+K +L+GS    I   Y  
Sbjct: 304 GGAIRGW-DRRNFYYFQMLKSLAEHYEFDVEAPWGTLNSSVQKVVLYGSGKENIEFKYMN 362

Query: 361 ---DDGLRRYQTNKAFEGIVNNLERRFRETDSAWTRDELSKYQSSQPCEVCKGARLKPEA 417
              D  +RR+     FEG+++N+ERR++ET+S+  R+EL+K+ S++PC  C+G RLK EA
Sbjct: 363 DRGDTSVRRHP----FEGVLHNMERRYKETESSAVREELAKFISNRPCTSCEGTRLKREA 418

Query: 418 LAVKIRGRNISEAAELSIAGAGAWFSELNEHLRPKDREIAYRILKEINERLGFLNAVGLE 477
             V +    +   +++SI  A  +F+ L   L  +  +IA ++LKEI +RL FL  VGL 
Sbjct: 419 RHVFVENTPLPTISDMSIGHAMDFFNNLK--LSGQRAQIAEKVLKEIGDRLKFLVNVGLN 476

Query: 478 YLTLSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLETLKRLRD 537
           YLTLSR + TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDN+RLL TL  LR+
Sbjct: 477 YLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRN 536

Query: 538 IGNTVVVVEHDEDAIRSADYLVDMGPGAGQHGGSVIAQGTPEEVQKNPDSITAQYLNGTR 597
           +GNTV+VVEHDEDAIR+AD+++D+GPGAG HGG V+A+G  E++   P+S+T Q+++G R
Sbjct: 537 LGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGKLEDIMAVPESLTGQFMSGKR 596

Query: 598 FVPVPDTRRPGHPGQFLEVQGARANNLQNVSTRIPLGTFTCVTGVSGGGKSTLIIETLYK 657
            + VP  R P +P + L++ GAR NNL++V+  +P+G FTC+TGVSG GKSTLI +TL+ 
Sbjct: 597 KIEVPKQRVPANPEKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFP 656

Query: 658 AVARKLMGAR-EHPAEHDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPMRDWFA 716
              R+L GA    PA +  V GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+R+ FA
Sbjct: 657 IAQRQLNGATIAEPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA 716

Query: 717 GLPEAKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETL 776
           G+PE+++RGY PGRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD C GKRYNRETL
Sbjct: 717 GVPESRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETL 776

Query: 777 EVTYRDKTIADVLDMTVEEGKEFFKAVPGIRDKLDTLERVGLGYIHIGQAATTLSGGEAQ 836
           E+ Y+ KTI +VLDMT+EE +EFF AVP +  KL TL  VGL YI +GQ+ATTLSGGEAQ
Sbjct: 777 EIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQ 836

Query: 837 RVKLSKELSRRATGRTLYILDEPTTGLHFADVEKLMEVLHALVDQGNTVLVIEHNLEVIK 896
           RVKL++ELS+R TG+TLYILDEPTTGLHFAD+++L+EVLH L DQGNT++VIEHNL+VIK
Sbjct: 837 RVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIK 896

Query: 897 TADWIIDLGPEGGTGGGEIVAEGTPEDVAKVERSYTGRYLAPYLK 941
           TADWI+DLGPEGG+GGGEI+  GTPE VA+ E SYT R+L P LK
Sbjct: 897 TADWIVDLGPEGGSGGGEILVSGTPETVAECEASYTARFLKPMLK 941



 Score = 65.5 bits (158), Expect = 2e-14
 Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 3   KYISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 62
           K + + GAR +NLK+V + LP      ITG+SGSGKS+L  DT++   QR+   +  A  
Sbjct: 611 KVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIA-- 668

Query: 63  RQFLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPYSP 122
               E     DV  +E     I I+Q    + PRS   T T ++  +R L+A  G+P S 
Sbjct: 669 ----EPAPYRDVQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFA--GVPESR 722

Query: 123 ATG 125
           + G
Sbjct: 723 SRG 725