Pairwise Alignments

Query, 300 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  187 bits (474), Expect = 3e-52
 Identities = 109/287 (37%), Positives = 164/287 (57%), Gaps = 1/287 (0%)

Query: 8   EMRVFLRVAVQGSFSAAGRDVGMTPSSTAKLVGRLEERLGVRLVERSTRKLRLTAEGELY 67
           +MR+F +V   GSF+AA   +G++    ++ + +LEERLGVRL+ RSTR+L +T  G+ Y
Sbjct: 6   DMRIFCQVMDSGSFTAAADQLGLSKQFVSRRLMQLEERLGVRLLNRSTRRLDVTPLGQSY 65

Query: 68  RERAQALLGELDALDAEIAGGARAPTGLIRANASVPFGQHCLLPLLPEFLRDHPGITMDV 127
            E A  LL E++ ++  IAG    P G IR +A + F    L  LLP FL+ +  +T++V
Sbjct: 66  YESALRLLSEVEHVEQGIAGQTAEPRGTIRLSAPLSFAVAHLGCLLPVFLQRYRDVTVEV 125

Query: 128 TMTDEVVDLYAARVDVAFRAGPLSDSALLAQRLGVVRRRIVASPAYLDRKGVPTTAADLE 187
            ++D  VDL     D+A R G L DS L+A+RL  ++R   ASPAYL  +G P    DL 
Sbjct: 126 DLSDRPVDLLGEGYDLALRIGVLEDSTLIARRLAAIQRVYCASPAYLAERGTPVHPEDLH 185

Query: 188 AHDCLGFNFRRAAAVWPLKSGGRLVDREVPTRILANNGETVRHMALLGLGLARLAEYHVR 247
           +HDCL +   R    W  +  G+ +   V  R+  NNGE ++  A+ G+G+  L  + V 
Sbjct: 186 SHDCLPYGHGRQVQ-WRFEGQGKPLTVNVTGRMRVNNGELLKDAAIAGMGITYLPTFIVG 244

Query: 248 DDLREGRLVAVLDDTLVDTEEIHAVYTGRDRAPRRVRAFLDHMAPRL 294
             L++GRLV VLD+       + AVY    +  R V+A ++ +  RL
Sbjct: 245 SALKDGRLVPVLDNFRPAPLTLSAVYPQHRQGSRPVQALIEFLRERL 291